CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SSLN_0001407901
(
Schistocephalus solidus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
SSLN_0001407901
T259651_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SSLN_0001407901-mRNA-1
MADS box
43
90
FMHDRVRRCSTFSKRKNGLMKKAHELSELTGADVLLVVASPTNHVYTY
Links
Other
MADS box
family TFs
Other
Schistocephalus solidus
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPER_0002407601
Spirometra erinaceieuropaei
SPER_0002407601
N
1.000
SPER_0003232401
Spirometra erinaceieuropaei
SPER_0003232401
N
1.000
ECANG7_07506
Echinococcus canadensis
ECANG7_07506
I
0.833
EmuJ_000377500
Echinococcus multilocularis
EmuJ_000377500
I
0.833
HDID_0000576901
Hymenolepis diminuta
HDID_0000576901
I
0.833
HmN_000858800
Hymenolepis microstoma
HmN_000858800
I
0.833
HNAJ_0000775201
Hymenolepis nana
HNAJ_0000775201
I
0.833
MCOS_0000609801
Mesocestoides corti
MCOS_0000609801
I
0.833
TASK_0000457101
Taenia asiatica
TASK_0000457101
I
0.833
TsM_000925700
Taenia solium
TsM_000925700
I
0.833
TTAC_0000870401
Hydatigera taeniaeformis
TTAC_0000870401
I
0.833
SROB_0002013401
Schistosoma rodhaini
SROB_0002013401
I
0.771
Smp_097730
Schistosoma mansoni
Smp_097730
I
0.750
Sjc_0026780
Schistosoma japonicum
Sjc_0026780
I
0.750
A_01192
Schistosoma haematobium
A_01192
I
0.750
SCUD_0000460501
Schistosoma curassoni
SCUD_0000460501
I
0.750
SMRZ_0002507801
Schistosoma margrebowiei
SMRZ_0002507801
I
0.750
SMTD_0001950801
Schistosoma mattheei
SMTD_0001950801
I
0.750
SMU15039528
Schmidtea mediterranea
SMU15039528
N
0.729
ECPE_0001369301
Echinostoma caproni
ECPE_0001369301
I
0.729
csin112160
Clonorchis sinensis
csin112160
N
0.708
T265_07052
Opisthorchis viverrini
T265_07052
N
0.708