CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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her4.4
(
Danio rerio
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSDARG00000009822
T033634_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000073721
bHLH
18
74
NKLRKPMVEKIRRERINSSIEKLKTLLAQEFVKQQPDSRQEKADILEMTLDFLRRSQ
ENSDARP00000131653
bHLH
18
74
NKLRKPMVEKIRRERINSSIEKLKTLLAQEFVKQQPDSRQEKADILEMTLDFLRRSQ
Links
Other
bHLH
family TFs
Other
Danio rerio
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.160570
Cucumis sativus
Cucsa.160570
N
PK00855.1
Cannabis sativa
PK00855.1
N
SapurV1A.0320s0130
Salix purpurea
SapurV1A.0320s0130
N
SapurV1A.0004s1050
Salix purpurea
SapurV1A.0004s1050
N
MDP0000311848
Malus domestica
MDP0000311848
N
gene12179-v1.0-hybrid
Fragaria vesca
gene12179-v1.0-hybrid
N
evm.TU.supercontig_21.26
Carica papaya
evm.TU.supercontig_21.26
N
Eucgr.F02154
Eucalyptus grandis
Eucgr.F02154
N
Aquca_007_00504
Aquilegia coerulea
Aquca_007_00504
N
Cucsa.311970
Cucumis sativus
Cucsa.311970
N
Cucsa.311960
Cucumis sativus
Cucsa.311960
N
Cucsa.311950
Cucumis sativus
Cucsa.311950
N
Cucsa.311940
Cucumis sativus
Cucsa.311940
N
Cucsa.311930
Cucumis sativus
Cucsa.311930
N
AMTR_s00016p00255950
Amborella trichopoda
AMTR_s00016p00255950
N
cassava4465.m1
Manihot esculenta
cassava4465.m1
N
cassava31065.valid.m1
Manihot esculenta
cassava31065.valid.m1
N
29908.m006268
Ricinus communis
29908.m006268
N
Pm004407
Prunus mume
Pm004407
N
Cla023409
Citrullus lanatus
Cla023409
N
Cla022491
Citrullus lanatus
Cla022491
N
VIT_18s0001g07620
Vitis vinifera
VIT_18s0001g07620
N
Solyc12g087970.1
Solanum lycopersicum
Solyc12g087970.1
N
Solyc04g076360.2
Solanum lycopersicum
Solyc04g076360.2
N
PRUPE_ppa1027142mg
Prunus persica
PRUPE_ppa1027142mg
N
POPTR_0002s10670
Populus trichocarpa
POPTR_0002s10670
N
PGSC0003DMG400009342
Solanum tuberosum
PGSC0003DMG400009342
N