CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc12g087970.1
(
Solanum lycopersicum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Solyc12g087970.1
T280312_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc12g087970.1.1
Myb
203
248
RKPWSEAEDVELIAAVQKCGEGNWANILKGDFKGDRTASQLSQRWA
Links
Other
Myb/SANT
family TFs
Other
Solanum lycopersicum
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK00855.1
Cannabis sativa
PK00855.1
N
0.883
Eucgr.F02154
Eucalyptus grandis
Eucgr.F02154
N
0.873
VIT_18s0001g07620
Vitis vinifera
VIT_18s0001g07620
N
0.832
Cla022491
Citrullus lanatus
Cla022491
N
0.828
evm.TU.supercontig_21.26
Carica papaya
evm.TU.supercontig_21.26
N
0.824
Cucsa.160570
Cucumis sativus
Cucsa.160570
N
0.818
cassava4465.m1
Manihot esculenta
cassava4465.m1
N
0.816
29908.m006268
Ricinus communis
29908.m006268
N
0.816
cassava31065.valid.m1
Manihot esculenta
cassava31065.valid.m1
N
0.816
POPTR_0002s10670
Populus trichocarpa
POPTR_0002s10670
N
0.806
SapurV1A.0004s1050
Salix purpurea
SapurV1A.0004s1050
N
0.806
Pm004407
Prunus mume
Pm004407
N
0.801
PRUPE_ppa1027142mg
Prunus persica
PRUPE_ppa1027142mg
N
0.801
Cucsa.311970
Cucumis sativus
Cucsa.311970
N
0.781
SapurV1A.0320s0130
Salix purpurea
SapurV1A.0320s0130
N
0.781
Cucsa.311940
Cucumis sativus
Cucsa.311940
N
0.781
Cucsa.311960
Cucumis sativus
Cucsa.311960
N
0.781
Cucsa.311950
Cucumis sativus
Cucsa.311950
N
0.781
Cucsa.311930
Cucumis sativus
Cucsa.311930
N
0.781
PGSC0003DMG400009342
Solanum tuberosum
PGSC0003DMG400009342
N
0.773
Solyc04g076360.2
Solanum lycopersicum
Solyc04g076360.2
N
0.773
Cla023409
Citrullus lanatus
Cla023409
N
0.768
AMTR_s00016p00255950
Amborella trichopoda
AMTR_s00016p00255950
N
0.767
GSMUA_Achr6G12970_001
Musa acuminata
GSMUA_Achr6G12970_001
N
0.736
Aquca_007_00504
Aquilegia coerulea
Aquca_007_00504
N
0.731
orange1.1g007452m.g
Citrus sinensis
orange1.1g007452m.g
N
0.706
Ciclev10000622m.g
Citrus clementina
Ciclev10000622m.g
N
0.706
gene12179-v1.0-hybrid
Fragaria vesca
gene12179-v1.0-hybrid
N
0.705
MDP0000311848
Malus domestica
MDP0000311848
N
0.687
GSMUA_Achr8G16170_001
Musa acuminata
GSMUA_Achr8G16170_001
N
0.684
AT1G09710
Arabidopsis thaliana
AT1G09710
N
0.675
fgenesh2_kg.1__1026__AT1G09710.1
Arabidopsis lyrata
fgenesh2_kg.1__1026__AT1G09710.1
N
0.675
Bostr.25494s0029
Boechera stricta
Bostr.25494s0029
N
0.675
Gorai.002G139000
Gossypium raimondii
Gorai.002G139000
N
0.675
Cagra.4395s0155
Capsella grandiflora
Cagra.4395s0155
N
0.675
Carubv10010985m.g
Capsella rubella
Carubv10010985m.g
N
0.675
TCM_034516
Theobroma cacao
TCM_034516
N
0.673