POPTR_0002s10670 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0002s10670 T278214_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s10670.1 Myb 207 252

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0004s1050 Salix purpurea SapurV1A.0004s1050 N 0.909
cassava31065.valid.m1 Manihot esculenta cassava31065.valid.m1 N 0.881
cassava4465.m1 Manihot esculenta cassava4465.m1 N 0.881
29908.m006268 Ricinus communis 29908.m006268 N 0.863
evm.TU.supercontig_21.26 Carica papaya evm.TU.supercontig_21.26 N 0.863
SapurV1A.0320s0130 Salix purpurea SapurV1A.0320s0130 N 0.858
PK00855.1 Cannabis sativa PK00855.1 N 0.814
Cla022491 Citrullus lanatus Cla022491 N 0.808
AMTR_s00016p00255950 Amborella trichopoda AMTR_s00016p00255950 N 0.806
Solyc12g087970.1 Solanum lycopersicum Solyc12g087970.1 N 0.806
Eucgr.F02154 Eucalyptus grandis Eucgr.F02154 N 0.806
Cucsa.160570 Cucumis sativus Cucsa.160570 N 0.800
Aquca_007_00504 Aquilegia coerulea Aquca_007_00504 N 0.798
GSMUA_Achr6G12970_001 Musa acuminata GSMUA_Achr6G12970_001 N 0.793
Ciclev10000622m.g Citrus clementina Ciclev10000622m.g N 0.761
orange1.1g007452m.g Citrus sinensis orange1.1g007452m.g N 0.761
VIT_18s0001g07620 Vitis vinifera VIT_18s0001g07620 N 0.746
PRUPE_ppa1027142mg Prunus persica PRUPE_ppa1027142mg N 0.734
Pm004407 Prunus mume Pm004407 N 0.734
PGSC0003DMG400009342 Solanum tuberosum PGSC0003DMG400009342 N 0.705
Solyc04g076360.2 Solanum lycopersicum Solyc04g076360.2 N 0.705
Cucsa.311930 Cucumis sativus Cucsa.311930 N 0.696
Cucsa.311940 Cucumis sativus Cucsa.311940 N 0.696
Cucsa.311950 Cucumis sativus Cucsa.311950 N 0.696
Cucsa.311960 Cucumis sativus Cucsa.311960 N 0.696
Cucsa.311970 Cucumis sativus Cucsa.311970 N 0.696
Cla023409 Citrullus lanatus Cla023409 N 0.683
Aquca_007_00503 Aquilegia coerulea Aquca_007_00503 N 0.663