orange1.1g007452m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g007452m.g T288768_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g007452m Myb 204 252
orange1.1g009693m Myb 129 177
orange1.1g010139m Myb 118 166
orange1.1g010767m Myb 103 151

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10000622m.g Citrus clementina Ciclev10000622m.g N 0.909
evm.TU.supercontig_21.26 Carica papaya evm.TU.supercontig_21.26 N 0.791
AMTR_s00016p00255950 Amborella trichopoda AMTR_s00016p00255950 N 0.773
29908.m006268 Ricinus communis 29908.m006268 N 0.771
POPTR_0002s10670 Populus trichocarpa POPTR_0002s10670 N 0.761
SapurV1A.0004s1050 Salix purpurea SapurV1A.0004s1050 N 0.761
cassava31065.valid.m1 Manihot esculenta cassava31065.valid.m1 N 0.753
cassava4465.m1 Manihot esculenta cassava4465.m1 N 0.753
Cucsa.311960 Cucumis sativus Cucsa.311960 N 0.744
Cucsa.311940 Cucumis sativus Cucsa.311940 N 0.744
Cucsa.311950 Cucumis sativus Cucsa.311950 N 0.744
Cucsa.311930 Cucumis sativus Cucsa.311930 N 0.744
Cucsa.311970 Cucumis sativus Cucsa.311970 N 0.744
Aquca_007_00504 Aquilegia coerulea Aquca_007_00504 N 0.736
PK00855.1 Cannabis sativa PK00855.1 N 0.732
Cla022491 Citrullus lanatus Cla022491 N 0.726
SapurV1A.0320s0130 Salix purpurea SapurV1A.0320s0130 N 0.720
GSMUA_Achr6G12970_001 Musa acuminata GSMUA_Achr6G12970_001 N 0.719
Eucgr.F02154 Eucalyptus grandis Eucgr.F02154 N 0.714
Cucsa.160570 Cucumis sativus Cucsa.160570 N 0.708
Solyc12g087970.1 Solanum lycopersicum Solyc12g087970.1 N 0.706
VIT_18s0001g07620 Vitis vinifera VIT_18s0001g07620 N 0.703
PGSC0003DMG400009342 Solanum tuberosum PGSC0003DMG400009342 N 0.695
Solyc04g076360.2 Solanum lycopersicum Solyc04g076360.2 N 0.695
Aquca_007_00503 Aquilegia coerulea Aquca_007_00503 N 0.688
Bo5g010120 Brassica oleracea Bo5g010120 N 0.671
Bra019998 Brassica rapa Bra019998 N 0.671