BHLHE41 (Echinops telfairi)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSETEG00000017468 T034078_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.914 1.000
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.914 1.000
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.914 1.000
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.914 1.000
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.914 1.000
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.914 1.000
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.914 1.000
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.914 0.981
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.914 0.981
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.914 0.981
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.914 0.981
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.914 0.981
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.914 0.981
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.914 0.981
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.914 0.981
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.914 0.981
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.914 0.981
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.914 0.981
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.914 0.981
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.914 0.981
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.914 0.981
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000014187 bHLH 46 100

Links

Other bHLH family TFs
Other Echinops telfairi TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava26650.m1 Manihot esculenta cassava26650.m1 N 0.000
chr2.CM0272.20.nd Lotus japonicus chr2.CM0272.20.nd N 0.000
Thhalv10027037m.g Eutrema salsugineum Thhalv10027037m.g N 0.000
SapurV1A.0085s0060 Salix purpurea SapurV1A.0085s0060 N 0.000
orange1.1g039420m.g Citrus sinensis orange1.1g039420m.g N 0.000
MDP0000291622 Malus domestica MDP0000291622 N 0.000
MDP0000215412 Malus domestica MDP0000215412 N 0.000
MDP0000192895 Malus domestica MDP0000192895 N 0.000
MDP0000125133 Malus domestica MDP0000125133 N 0.000
Gorai.003G002500 Gossypium raimondii Gorai.003G002500 N 0.000
gene13055-v1.0-hybrid Fragaria vesca gene13055-v1.0-hybrid N 0.000
Ciclev10027531m.g Citrus clementina Ciclev10027531m.g N 0.000
Carubv10005148m.g Capsella rubella Carubv10005148m.g N 0.000
Cagra.2350s0102 Capsella grandiflora Cagra.2350s0102 N 0.000
Bostr.7867s1419 Boechera stricta Bostr.7867s1419 N 0.000
Aquca_015_00350 Aquilegia coerulea Aquca_015_00350 N 0.000
AMTR_s00044p00165760 Amborella trichopoda AMTR_s00044p00165760 N 0.000
29830.m001444 Ricinus communis 29830.m001444 N 0.000
Pm026816 Prunus mume Pm026816 N 0.000
Cla014580 Citrullus lanatus Cla014580 N 0.000
VIT_04s0044g00060 Vitis vinifera VIT_04s0044g00060 N 0.000
TCM_000070 Theobroma cacao TCM_000070 N 0.000
PRUPE_ppa011563mg Prunus persica PRUPE_ppa011563mg N 0.000
POPTR_0005s10400 Populus trichocarpa POPTR_0005s10400 N 0.000
MTR_5g024070 Medicago truncatula MTR_5g024070 N 0.000
GSMUA_Achr8G13370_001 Musa acuminata GSMUA_Achr8G13370_001 N 0.000
GLYMA11G09080 Glycine max GLYMA11G09080 N 0.000
GLYMA01G36360 Glycine max GLYMA01G36360 N 0.000
fgenesh2_kg.7__520__AT4G35590.1 Arabidopsis lyrata fgenesh2_kg.7__520__AT4G35590.1 N 0.000
Bra011626 Brassica rapa Bra011626 N 0.000
Bo1g006340 Brassica oleracea Bo1g006340 N 0.000