CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFCAG00000022143
(
Felis catus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSFCAG00000022143
T034212_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bhlhe41
M01739_2.00
Mus musculus
NMNCGTGMN
NKCACGNKN
PBM
Weirauch et al.(2014)
pTH5060
0.914
1.000
BHLHE41
M02782_2.00
Homo sapiens
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB3_1
0.914
1.000
BHLHE41
M02783_2.00
Homo sapiens
RKCACGTGAY
RTCACGTGMY
SELEX
Jolma et al.(2013)
BHLHE41_1
0.914
1.000
BHLHE41
M04106_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX
0.914
1.000
BHLHE41
M09833_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q2
0.914
1.000
BHLHE41
M09834_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q3
0.914
1.000
BHLHE41
M04107_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX
0.914
1.000
Bhlhe40
M00119_2.00
Mus musculus
DCACGTGMN
NKCACGTGH
PBM
Badis et al.(2009)
Bhlhb2_1274
0.914
0.981
Bhlhe40
M01738_2.00
Mus musculus
NCACRNBN
NVNYGTGN
PBM
Weirauch et al.(2014)
pTH4330
0.914
0.981
BHLHE40
M02788_2.00
Homo sapiens
NKCACGTGMH
DKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB2_1
0.914
0.981
Bhlhe40
M02817_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_1
0.914
0.981
Bhlhe40
M02818_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_2
0.914
0.981
BHLHE40
M04126_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX
0.914
0.981
BHLHE40
M07798_2.00
Homo sapiens
DCACGTGMSN
NSKCACGTGH
ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha
0.914
0.981
BHLHE40
M08726_2.00
Homo sapiens
DDCACGTGMS
SKCACGTGHH
Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A
0.914
0.981
Bhlhe40
M08761_2.00
Mus musculus
DCACGTGMS
SKCACGTGH
Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A
0.914
0.981
BHLHE40
M09456_2.00
Homo sapiens
DCACGTGMNN
NNKCACGTGH
Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477
0.914
0.981
BHLHE40
M09842_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BHLHE40_03
0.914
0.981
BHLHE40
M09843_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q2
0.914
0.981
BHLHE40
M09844_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q3
0.914
0.981
BHLHE40
M09845_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STRA13_01
0.914
0.981
BHLHE40
M04127_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000019464
bHLH
46
100
KLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALT
Links
Other
bHLH
family TFs
Other
Felis catus
TFs
117 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_7DS_405F08A53
Triticum aestivum
Traes_7DS_405F08A53
I
0.000
TRIUR3_19503
Triticum urartu
TRIUR3_19503
I
0.000
Pavir.Ab02992
Panicum virgatum
Pavir.Ab02992
I
0.000
F775_07483
Aegilops tauschii
F775_07483
I
0.000
MLOC_12609
Hordeum vulgare
MLOC_12609
I
0.000
MLOC_59560
Hordeum vulgare
MLOC_59560
I
0.000
Gorai.003G002500
Gossypium raimondii
Gorai.003G002500
N
0.000
Pm026816
Prunus mume
Pm026816
N
0.000
29830.m001444
Ricinus communis
29830.m001444
N
0.000
cassava26650.m1
Manihot esculenta
cassava26650.m1
N
0.000
fgenesh1_pg.scaffold_823000001
Physcomitrella patens
fgenesh1_pg.scaffold_823000001
N
0.000
Aquca_015_00350
Aquilegia coerulea
Aquca_015_00350
N
0.000
Cagra.2350s0102
Capsella grandiflora
Cagra.2350s0102
N
0.000
Carubv10005148m.g
Capsella rubella
Carubv10005148m.g
N
0.000
Ciclev10027531m.g
Citrus clementina
Ciclev10027531m.g
N
0.000
gene13055-v1.0-hybrid
Fragaria vesca
gene13055-v1.0-hybrid
N
0.000
SELMODRAFT_73118
Selaginella moellendorffii
SELMODRAFT_73118
N
0.000
MDP0000125133
Malus domestica
MDP0000125133
N
0.000
MDP0000192895
Malus domestica
MDP0000192895
N
0.000
MDP0000215412
Malus domestica
MDP0000215412
N
0.000
MDP0000291622
Malus domestica
MDP0000291622
N
0.000
orange1.1g039420m.g
Citrus sinensis
orange1.1g039420m.g
N
0.000
Thhalv10027037m.g
Eutrema salsugineum
Thhalv10027037m.g
N
0.000
chr2.CM0272.20.nd
Lotus japonicus
chr2.CM0272.20.nd
N
0.000
SELMODRAFT_408627
Selaginella moellendorffii
SELMODRAFT_408627
N
0.000
RKD5
Arabidopsis thaliana
AT4G35590
N
0.000
Bo1g006340
Brassica oleracea
Bo1g006340
N
0.000
Bra011626
Brassica rapa
Bra011626
N
0.000
fgenesh2_kg.7__520__AT4G35590.1
Arabidopsis lyrata
fgenesh2_kg.7__520__AT4G35590.1
N
0.000
GLYMA01G36360
Glycine max
GLYMA01G36360
N
0.000
GLYMA11G09080
Glycine max
GLYMA11G09080
N
0.000
GSMUA_Achr8G13370_001
Musa acuminata
GSMUA_Achr8G13370_001
N
0.000
MTR_5g024070
Medicago truncatula
MTR_5g024070
N
0.000
OGLUM01G22860
Oryza glumaepatula
OGLUM01G22860
N
0.000
PRUPE_ppa011563mg
Prunus persica
PRUPE_ppa011563mg
N
0.000
TCM_000070
Theobroma cacao
TCM_000070
N
0.000
SELMODRAFT_73108
Selaginella moellendorffii
SELMODRAFT_73108
N
0.000
SELMODRAFT_73109
Selaginella moellendorffii
SELMODRAFT_73109
N
0.000
SELMODRAFT_73110
Selaginella moellendorffii
SELMODRAFT_73110
N
0.000
SELMODRAFT_73111
Selaginella moellendorffii
SELMODRAFT_73111
N
0.000
SELMODRAFT_73112
Selaginella moellendorffii
SELMODRAFT_73112
N
0.000
SELMODRAFT_73116
Selaginella moellendorffii
SELMODRAFT_73116
N
0.000
SELMODRAFT_73117
Selaginella moellendorffii
SELMODRAFT_73117
N
0.000
AMTR_s00021p00218190
Amborella trichopoda
AMTR_s00021p00218190
N
0.000
SELMODRAFT_73278
Selaginella moellendorffii
SELMODRAFT_73278
N
0.000