CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HIF3A
(
Homo sapiens
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSG00000124440
T034279_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hif3a
M09885_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MOP7_01
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000300862
bHLH
13
66
RKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLTISYLRMHR
ENSP00000366898
bHLH
15
68
RKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLTISYLRMHR
ENSP00000432809
bHLH
15
68
RKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLTISYLRMHR
Links
Other
bHLH
family TFs
Other
Homo sapiens
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCF3
Homo sapiens
ENSG00000071564
D
0.000
TCF12
Homo sapiens
ENSG00000140262
D
0.000
TCF4
Homo sapiens
ENSG00000196628
D
0.000
Tcf3
Mus musculus
ENSMUSG00000020167
D
0.000
Tcf12
Mus musculus
ENSMUSG00000032228
D
0.000
Tcf4
Mus musculus
ENSMUSG00000053477
D
0.000
TCF4
Anolis carolinensis
ENSACAG00000008863
I
0.000
TCF12
Anolis carolinensis
ENSACAG00000014277
I
0.000
ENSACAG00000027602
Anolis carolinensis
ENSACAG00000027602
I
0.000
ENSAMEG00000003503
Ailuropoda melanoleuca
ENSAMEG00000003503
I
0.000
ENSAMEG00000010612
Ailuropoda melanoleuca
ENSAMEG00000010612
I
0.000
ENSAMEG00000017162
Ailuropoda melanoleuca
ENSAMEG00000017162
I
0.000
ENSAMXG00000006548
Astyanax mexicanus
ENSAMXG00000006548
I
0.000
ENSAMXG00000009833
Astyanax mexicanus
ENSAMXG00000009833
I
0.000
ENSAMXG00000014804
Astyanax mexicanus
ENSAMXG00000014804
I
0.000
ENSAMXG00000017947
Astyanax mexicanus
ENSAMXG00000017947
I
0.000
ENSAPLG00000001939
Anas platyrhynchos
ENSAPLG00000001939
I
0.000
ENSAPLG00000011135
Anas platyrhynchos
ENSAPLG00000011135
I
0.000
TCF12
Bos taurus
ENSBTAG00000002586
I
0.000
TCF3
Bos taurus
ENSBTAG00000008695
I
0.000
TCF4
Bos taurus
ENSBTAG00000016462
I
0.000
TCF4
Canis familiaris
ENSCAFG00000000140
I
0.000
TCF12
Canis familiaris
ENSCAFG00000016200
I
0.000
TCF4
Choloepus hoffmanni
ENSCHOG00000000331
I
0.000
TCF12
Choloepus hoffmanni
ENSCHOG00000003168
I
0.000
TCF4
Callithrix jacchus
ENSCJAG00000004038
I
0.000
TCF3
Callithrix jacchus
ENSCJAG00000004642
I
0.000
TCF12
Cavia porcellus
ENSCPOG00000009153
I
0.000
TCF3
Cavia porcellus
ENSCPOG00000023586
I
0.000
ENSCSAG00000011901
Chlorocebus sabaeus
ENSCSAG00000011901
I
0.000
ENSCSAG00000018141
Chlorocebus sabaeus
ENSCSAG00000018141
I
0.000
tcf12
Danio rerio
ENSDARG00000004714
I
0.000
tcf3a
Danio rerio
ENSDARG00000005915
I
0.000
tcf3b
Danio rerio
ENSDARG00000099999
I
0.000
ENSDNOG00000013859
Dasypus novemcinctus
ENSDNOG00000013859
I
0.000
ENSDNOG00000042880
Dasypus novemcinctus
ENSDNOG00000042880
I
0.000
Tcf3
Dipodomys ordii
ENSDORG00000004745
I
0.000
Tcf4
Dipodomys ordii
ENSDORG00000012697
I
0.000
TCF3
Equus caballus
ENSECAG00000000623
I
0.000
TCF12
Equus caballus
ENSECAG00000011678
I
0.000
TCF4
Equus caballus
ENSECAG00000017265
I
0.000
TCF4
Erinaceus europaeus
ENSEEUG00000000134
I
0.000
TCF12
Erinaceus europaeus
ENSEEUG00000002182
I
0.000
TCF3
Echinops telfairi
ENSETEG00000015388
I
0.000
ENSFALG00000011409
Ficedula albicollis
ENSFALG00000011409
I
0.000
ENSFALG00000012146
Ficedula albicollis
ENSFALG00000012146
I
0.000
TCF4
Felis catus
ENSFCAG00000014682
I
0.000
TCF3
Felis catus
ENSFCAG00000023514
I
0.000
TCF12
Felis catus
ENSFCAG00000031674
I
0.000
ENSGACG00000000628
Gasterosteus aculeatus
ENSGACG00000000628
I
0.000
TCF12
Gasterosteus aculeatus
ENSGACG00000006101
I
0.000
tcf3b
Gasterosteus aculeatus
ENSGACG00000012737
I
0.000
tcf3a
Gasterosteus aculeatus
ENSGACG00000015282
I
0.000
tcf12
Gasterosteus aculeatus
ENSGACG00000015831
I
0.000
TCF3
Gallus gallus
ENSGALG00000001093
I
0.000
TCF12
Gallus gallus
ENSGALG00000004304
I
0.000
TCF3
Gorilla gorilla
ENSGGOG00000003667
I
0.000
TCF12
Gorilla gorilla
ENSGGOG00000008166
I
0.000
TCF4
Gorilla gorilla
ENSGGOG00000016297
I
0.000
ENSGMOG00000004189
Gadus morhua
ENSGMOG00000004189
I
0.000
ENSGMOG00000008934
Gadus morhua
ENSGMOG00000008934
I
0.000
ENSGMOG00000012207
Gadus morhua
ENSGMOG00000012207
I
0.000
ENSGMOG00000015710
Gadus morhua
ENSGMOG00000015710
I
0.000
ENSGMOG00000018104
Gadus morhua
ENSGMOG00000018104
I
0.000
ENSLACG00000003485
Latimeria chalumnae
ENSLACG00000003485
I
0.000
ENSLACG00000014145
Latimeria chalumnae
ENSLACG00000014145
I
0.000
ENSLACG00000016589
Latimeria chalumnae
ENSLACG00000016589
I
0.000
TCF12
Loxodonta africana
ENSLAFG00000010546
I
0.000
TCF4
Loxodonta africana
ENSLAFG00000013449
I
0.000
TCF3
Loxodonta africana
ENSLAFG00000026277
I
0.000
ENSLOCG00000003538
Lepisosteus oculatus
ENSLOCG00000003538
I
0.000
ENSLOCG00000006013
Lepisosteus oculatus
ENSLOCG00000006013
I
0.000
ENSLOCG00000013539
Lepisosteus oculatus
ENSLOCG00000013539
I
0.000
ENSMEUG00000003794
Macropus eugenii
ENSMEUG00000003794
I
0.000
ENSMEUG00000014058
Macropus eugenii
ENSMEUG00000014058
I
0.000
TCF3
Meleagris gallopavo
ENSMGAG00000002388
I
0.000
ENSMGAG00000005667
Meleagris gallopavo
ENSMGAG00000005667
I
0.000
TCF12
Microcebus murinus
ENSMICG00000009110
I
0.000
TCF4
Microcebus murinus
ENSMICG00000012305
I
0.000
TCF12
Myotis lucifugus
ENSMLUG00000006205
I
0.000
TCF3
Myotis lucifugus
ENSMLUG00000011221
I
0.000
ENSMLUG00000012927
Myotis lucifugus
ENSMLUG00000012927
I
0.000
TCF12
Macaca mulatta
ENSMMUG00000004091
I
0.000
TCF3
Macaca mulatta
ENSMMUG00000009017
I
0.000
TCF4
Macaca mulatta
ENSMMUG00000012001
I
0.000
TCF3
Monodelphis domestica
ENSMODG00000004143
I
0.000
TCF12
Monodelphis domestica
ENSMODG00000008311
I
0.000
TCF4
Monodelphis domestica
ENSMODG00000020455
I
0.000
ENSMPUG00000004438
Mustela putorius furo
ENSMPUG00000004438
I
0.000
ENSMPUG00000008024
Mustela putorius furo
ENSMPUG00000008024
I
0.000
ENSMPUG00000016460
Mustela putorius furo
ENSMPUG00000016460
I
0.000
ENSNLEG00000001742
Nomascus leucogenys
ENSNLEG00000001742
I
0.000
ENSNLEG00000006707
Nomascus leucogenys
ENSNLEG00000006707
I
0.000
ENSNLEG00000007981
Nomascus leucogenys
ENSNLEG00000007981
I
0.000
TCF4
Ornithorhynchus anatinus
ENSOANG00000003082
I
0.000
TCF12
Ornithorhynchus anatinus
ENSOANG00000009462
I
0.000
TCF3
Ornithorhynchus anatinus
ENSOANG00000014335
I
0.000
ENSOARG00000005018
Ovis aries
ENSOARG00000005018
I
0.000
ENSOARG00000012495
Ovis aries
ENSOARG00000012495
I
0.000
ENSOARG00000020872
Ovis aries
ENSOARG00000020872
I
0.000
TCF4
Oryctolagus cuniculus
ENSOCUG00000002669
I
0.000
TCF12
Oryctolagus cuniculus
ENSOCUG00000017812
I
0.000
TCF3
Otolemur garnettii
ENSOGAG00000003587
I
0.000
ENSOGAG00000005735
Otolemur garnettii
ENSOGAG00000005735
I
0.000
TCF12
Otolemur garnettii
ENSOGAG00000006485
I
0.000
ENSONIG00000004816
Oreochromis niloticus
ENSONIG00000004816
I
0.000
ENSONIG00000005794
Oreochromis niloticus
ENSONIG00000005794
I
0.000
ENSONIG00000008337
Oreochromis niloticus
ENSONIG00000008337
I
0.000
ENSONIG00000010206
Oreochromis niloticus
ENSONIG00000010206
I
0.000
ENSONIG00000012720
Oreochromis niloticus
ENSONIG00000012720
I
0.000
tcf3b
Oryzias latipes
ENSORLG00000004923
I
0.000
TCF12
Oryzias latipes
ENSORLG00000005330
I
0.000
tcf12
Oryzias latipes
ENSORLG00000008508
I
0.000
ENSORLG00000015062
Oryzias latipes
ENSORLG00000015062
I
0.000
ENSPANG00000016063
Papio anubis
ENSPANG00000016063
I
0.000
ENSPANG00000017265
Papio anubis
ENSPANG00000017265
I
0.000
ENSPFOG00000001904
Poecilia formosa
ENSPFOG00000001904
I
0.000
ENSPFOG00000004140
Poecilia formosa
ENSPFOG00000004140
I
0.000
ENSPFOG00000009937
Poecilia formosa
ENSPFOG00000009937
I
0.000
ENSPFOG00000024249
Poecilia formosa
ENSPFOG00000024249
I
0.000
ENSPMAG00000000958
Petromyzon marinus
ENSPMAG00000000958
I
0.000
ENSPPYG00000006505
Pongo abelii
ENSPPYG00000006505
I
0.000
ENSPPYG00000009175
Pongo abelii
ENSPPYG00000009175
I
0.000
ENSPPYG00000009327
Pongo abelii
ENSPPYG00000009327
I
0.000
ENSPSIG00000004202
Pelodiscus sinensis
ENSPSIG00000004202
I
0.000
ENSPSIG00000011880
Pelodiscus sinensis
ENSPSIG00000011880
I
0.000
ENSPSIG00000014469
Pelodiscus sinensis
ENSPSIG00000014469
I
0.000
TCF12
Pan troglodytes
ENSPTRG00000007109
I
0.000
TCF4
Pan troglodytes
ENSPTRG00000010040
I
0.000
TCF3
Pan troglodytes
ENSPTRG00000010211
I
0.000
TCF4
Pteropus vampyrus
ENSPVAG00000002074
I
0.000
TCF12
Pteropus vampyrus
ENSPVAG00000006184
I
0.000
TCF3
Pteropus vampyrus
ENSPVAG00000014587
I
0.000
Tcf4
Rattus norvegicus
ENSRNOG00000012405
I
0.000
Tcf3
Rattus norvegicus
ENSRNOG00000051499
I
0.000
Tcf12
Rattus norvegicus
ENSRNOG00000057754
I
0.000
TCF4
Sorex araneus
ENSSARG00000001666
I
0.000
TCF12
Sorex araneus
ENSSARG00000013798
I
0.000
ENSSHAG00000013735
Sarcophilus harrisii
ENSSHAG00000013735
I
0.000
ENSSHAG00000014955
Sarcophilus harrisii
ENSSHAG00000014955
I
0.000
ENSSHAG00000015935
Sarcophilus harrisii
ENSSHAG00000015935
I
0.000
TCF4
Sus scrofa
ENSSSCG00000004535
I
0.000
TCF3
Sus scrofa
ENSSSCG00000013437
I
0.000
ENSSTOG00000001523
Ictidomys tridecemlineatus
ENSSTOG00000001523
I
0.000
ENSSTOG00000005134
Ictidomys tridecemlineatus
ENSSTOG00000005134
I
0.000
ENSSTOG00000010293
Ictidomys tridecemlineatus
ENSSTOG00000010293
I
0.000
TCF12
Tupaia belangeri
ENSTBEG00000002192
I
0.000
TCF4
Tupaia belangeri
ENSTBEG00000015498
I
0.000
TCF3
Taeniopygia guttata
ENSTGUG00000000208
I
0.000
TCF12
Taeniopygia guttata
ENSTGUG00000006270
I
0.000
tcf12
Tetraodon nigroviridis
ENSTNIG00000009326
I
0.000
ENSTNIG00000010330
Tetraodon nigroviridis
ENSTNIG00000010330
I
0.000
ENSTNIG00000013705
Tetraodon nigroviridis
ENSTNIG00000013705
I
0.000
tcf3a
Tetraodon nigroviridis
ENSTNIG00000015322
I
0.000
ENSTRUG00000002569
Takifugu rubripes
ENSTRUG00000002569
I
0.000
TCF12
Takifugu rubripes
ENSTRUG00000008110
I
0.000
tcf3a
Takifugu rubripes
ENSTRUG00000008147
I
0.000
tcf12
Takifugu rubripes
ENSTRUG00000017855
I
0.000
tcf3b
Takifugu rubripes
ENSTRUG00000017901
I
0.000
ENSTSYG00000009264
Tarsius syrichta
ENSTSYG00000009264
I
0.000
ENSTSYG00000009542
Tarsius syrichta
ENSTSYG00000009542
I
0.000
TCF12
Tursiops truncatus
ENSTTRG00000010817
I
0.000
TCF4
Tursiops truncatus
ENSTTRG00000011542
I
0.000
TCF12
Vicugna pacos
ENSVPAG00000006545
I
0.000
ENSXMAG00000006665
Xiphophorus maculatus
ENSXMAG00000006665
I
0.000
ENSXMAG00000011822
Xiphophorus maculatus
ENSXMAG00000011822
I
0.000
ENSXMAG00000012718
Xiphophorus maculatus
ENSXMAG00000012718
I
0.000
ENSXMAG00000014303
Xiphophorus maculatus
ENSXMAG00000014303
I
0.000
SMAR008523
Strigamia maritima
SMAR008523
I
0.000
SPU_016343
Strongylocentrotus purpuratus
SPU_016343
I
0.000
tetur02g08700
Tetranychus urticae
tetur02g08700
I
0.000
Aan_R011701
Calypte anna
Aan_R011701
I
0.000
Aan_R011985
Calypte anna
Aan_R011985
I
0.000
Afo_R000660
Aptenodytes forsteri
Afo_R000660
I
0.000
Afo_R010055
Aptenodytes forsteri
Afo_R010055
I
0.000
Afo_R014990
Aptenodytes forsteri
Afo_R014990
I
0.000
Alligator_sinensis_CCG017304.1
Alligator sinensis
Alligator_sinensis_CCG017304.1
I
0.000
Alligator_sinensis_CCG017823.1
Alligator sinensis
Alligator_sinensis_CCG017823.1
I
0.000
Brh_R007211
Buceros rhinoceros
Brh_R007211
I
0.000
Cmyd_10006705
Chelonia mydas
Cmyd_10006705
I
0.000
Cmyd_10006706
Chelonia mydas
Cmyd_10006706
I
0.000
Cmyd_10020160
Chelonia mydas
Cmyd_10020160
I
0.000
ENSBTAP00000028599-D1
Bos grunniens
ENSBTAP00000028599-D1
I
0.000
ENSBTAP00000048638-D1
Bos grunniens
ENSBTAP00000048638-D1
I
0.000
ENSP00000331057
Macaca fascicularis
ENSP00000331057
I
0.000
ENSP00000378813
Macaca fascicularis
ENSP00000378813
I
0.000
ENSP00000381382-D1
Bos grunniens
ENSP00000381382-D1
I
0.000
ENSP00000381382
Macaca fascicularis
ENSP00000381382
I
0.000
Gfo_R007595
Geospiza fortis
Gfo_R007595
I
0.000
Myotis_brandtii_Tcf12_10010436
Myotis brandtii
Myotis_brandtii_Tcf12_10010436
I
0.000
Myotis_brandtii_Tcf4_10017301
Myotis brandtii
Myotis_brandtii_Tcf4_10017301
I
0.000
Ogr01317
Ophisaurus gracilis
Ogr01317
I
0.000
Ogr01318
Ophisaurus gracilis
Ogr01318
I
0.000
Ogr02020
Ophisaurus gracilis
Ogr02020
I
0.000
Ogr11405
Ophisaurus gracilis
Ogr11405
I
0.000
Pvit_09822
Pogona vitticeps
Pvit_09822
I
0.000
Pvit_17395
Pogona vitticeps
Pvit_17395
I
0.000
Pvit_19114
Pogona vitticeps
Pvit_19114
I
0.000
Ocbimv22006241m.g
Octopus bimaculoides
Ocbimv22006241m.g
I
0.000
Sakowv30044282m.g
Saccoglossus kowalevskii
Sakowv30044282m.g
I
0.000
AAA92048
Xenopus laevis
AAA92048
I
0.000
AAA92050
Xenopus laevis
AAA92050
I
0.000
AAH44064
Xenopus laevis
AAH44064
I
0.000
SNAPOd2T00003591001
Oikopleura dioica
SNAPOd2T00003591001
I
0.000
tcf4
Xenopus tropicalis
XB-GENE-1011628
I
0.000
tcf4.S
Xenopus laevis
XB-GENE-1011632
I
0.000
tcf3
Xenopus tropicalis
XB-GENE-478265
I
0.000
tcf12
Xenopus laevis
XB-GENE-5799694
I
0.000
tcf12
Xenopus tropicalis
XB-GENE-5799694
I
0.000
tcf12.L
Xenopus laevis
XB-GENE-5799717
I
0.000
tcf3.L
Xenopus laevis
XB-GENE-865159
I
0.000
XP_002153906.1
Hydra magnipapillata
XP_002153906.1
I
0.000