TCF21 (Oryctolagus cuniculus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSOCUG00000017761 T036056_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tcf21
M01746_2.00 		Mus musculus
RMCAKMTGK
MCAKMTGKY		 PBM
Weirauch et al.(2014)
pTH5087 		0.914 1.000
Tcf21
M02819_2.00 		Mus musculus
VNAACAGCTGTTVN
NBAACAGCTGTTNB		 SELEX
Jolma et al.(2013)
Tcf21_1 		0.914 1.000
TCF21
M04092_2.00 		Homo sapiens
BAACAGCTGBYN
NRVCAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_1 		0.914 1.000
TCF21
M04093_2.00 		Homo sapiens
NRCCATATGKYV
BRMCATATGGYN		 SELEX
Yin et al.(2017)
TCF21_eDBD_HT-SELEX_2 		0.914 1.000
TCF21
M04094_2.00 		Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
TCF21
M04095_2.00 		Homo sapiens
BACCATATGKYV
BRMCATATGGTV		 SELEX
Yin et al.(2017)
TCF21_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
Msc
M01730_2.00 		Mus musculus
NVCRKMYGBN
NVCRKMYGBN		 PBM
Weirauch et al.(2014)
pTH5112 		0.914 0.981
MSC
M02801_2.00 		Homo sapiens
AACAGCTGTT
AACAGCTGTT		 SELEX
Jolma et al.(2013)
MSC_1 		0.914 0.981
MSC
M04183_2.00 		Homo sapiens
NRMCAGMTGBYN
NRVCAKCTGKYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_1 		0.914 0.981
MSC
M04184_2.00 		Homo sapiens
NRVCAYVTGBYN
NRVCABRTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_HT-SELEX_2 		0.914 0.981
MSC
M04187_2.00 		Homo sapiens
NRMCAGCTGBYV
BRVCAGCTGKYN		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_1 		0.914 0.981
MSC
M04188_2.00 		Homo sapiens
BRMCATATGKYN
NRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_HT-SELEX_2 		0.914 0.981
MSC
M04185_2.00 		Homo sapiens
NRVCAGCTGBBN
NVVCAGCTGBYN		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_1 		0.914 0.981
MSC
M04186_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_eDBD_Methyl-HT-SELEX_2 		0.914 0.981
MSC
M04189_2.00 		Homo sapiens
BRACAGCTGTYV
BRACAGCTGTYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_1 		0.914 0.981
MSC
M04190_2.00 		Homo sapiens
BRMCATATGKYV
BRMCATATGKYV		 SELEX
Yin et al.(2017)
MSC_FL_Methyl-HT-SELEX_2 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000015251 bHLH 80 132

Links

Other bHLH family TFs
Other Oryctolagus cuniculus TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G42040 Arabidopsis thaliana AT2G42040 D
Bostr.25993s0574 Boechera stricta Bostr.25993s0574 I
Cagra.13389s0020 Capsella grandiflora Cagra.13389s0020 I
Aquca_014_00855 Aquilegia coerulea Aquca_014_00855 I
mgf007626m Mimulus guttatus mgf007626m I
Cucsa.242590 Cucumis sativus Cucsa.242590 I
cassava36464.valid.m1 Manihot esculenta cassava36464.valid.m1 I
cassava36463.valid.m1 Manihot esculenta cassava36463.valid.m1 I
29613.m000379 Ricinus communis 29613.m000379 I
29613.m000377 Ricinus communis 29613.m000377 I
Pm025936 Prunus mume Pm025936 I
Ca_07320 Cicer arietinum Ca_07320 I
VIT_08s0007g06690 Vitis vinifera VIT_08s0007g06690 I
VIT_08s0007g06640 Vitis vinifera VIT_08s0007g06640 I
TCM_024932 Theobroma cacao TCM_024932 I
Solyc10g080530.1 Solanum lycopersicum Solyc10g080530.1 I
Sb10g006810 Sorghum bicolor Sb10g006810 I
PRUPE_ppa016277mg Prunus persica PRUPE_ppa016277mg I
POPTR_0016s05850 Populus trichocarpa POPTR_0016s05850 I
POPTR_0016s05840 Populus trichocarpa POPTR_0016s05840 I
POPTR_0006s20790 Populus trichocarpa POPTR_0006s20790 I
POPTR_0006s20770 Populus trichocarpa POPTR_0006s20770 I
PGSC0003DMG400023669 Solanum tuberosum PGSC0003DMG400023669 I
Pavir.J23833 Panicum virgatum Pavir.J23833 I
PDK_20s1436981g002 Phoenix dactylifera PDK_20s1436981g002 I
LjT35F01.80.nd Lotus japonicus LjT35F01.80.nd I
PK26699.1 Cannabis sativa PK26699.1 I
Thhalv10017052m.g Eutrema salsugineum Thhalv10017052m.g I
SapurV1A.3188s0010 Salix purpurea SapurV1A.3188s0010 I
SapurV1A.0854s0100 Salix purpurea SapurV1A.0854s0100 I
SapurV1A.0854s0090 Salix purpurea SapurV1A.0854s0090 I
SapurV1A.0251s0230 Salix purpurea SapurV1A.0251s0230 I
SapurV1A.0251s0220 Salix purpurea SapurV1A.0251s0220 I
Pavir.J25248 Panicum virgatum Pavir.J25248 I
OS02G0773600 Oryza sativa OS02G0773600 I
orange1.1g019760m.g Citrus sinensis orange1.1g019760m.g I
MDP0000154434 Malus domestica MDP0000154434 I
MDP0000121493 Malus domestica MDP0000121493 I
Gorai.012G100300 Gossypium raimondii Gorai.012G100300 I
Gorai.002G156300 Gossypium raimondii Gorai.002G156300 I
gene00456-v1.0-hybrid Fragaria vesca gene00456-v1.0-hybrid I
evm.TU.supercontig_85.54 Carica papaya evm.TU.supercontig_85.54 I
Eucgr.A02456 Eucalyptus grandis Eucgr.A02456 I
Ciclev10012160m.g Citrus clementina Ciclev10012160m.g I
Carubv10023878m.g Capsella rubella Carubv10023878m.g I
fgenesh2_kg.4__2350__AT2G42040.1 Arabidopsis lyrata fgenesh2_kg.4__2350__AT2G42040.1 I
OS06G0207600 Oryza sativa OS06G0207600 I
GSMUA_Achr3G20210_001 Musa acuminata GSMUA_Achr3G20210_001 I
GSMUA_Achr3G07730_001 Musa acuminata GSMUA_Achr3G07730_001 I
GSMUA_Achr10G29530_001 Musa acuminata GSMUA_Achr10G29530_001 I
GRMZM2G165991 Zea mays GRMZM2G165991 I
GRMZM2G033915 Zea mays GRMZM2G033915 I
GLYMA19G33070 Glycine max GLYMA19G33070 I
GLYMA09G16841 Glycine max GLYMA09G16841 I
GLYMA03G30170 Glycine max GLYMA03G30170 I
GLYMA02G28962 Glycine max GLYMA02G28962 I
GSMUA_Achr7G18600_001 Musa acuminata GSMUA_Achr7G18600_001 I
F775_01928 Aegilops tauschii F775_01928 I
BRADI1G46270 Brachypodium distachyon BRADI1G46270 I
Bra016897 Brassica rapa Bra016897 I
Bra004667 Brassica rapa Bra004667 I
Bra000251 Brassica rapa Bra000251 I
Bo4g191280 Brassica oleracea Bo4g191280 I
Bo4g014690 Brassica oleracea Bo4g014690 I
Bo3g035920 Brassica oleracea Bo3g035920 I
BGIOSGA022518 Oryza indica BGIOSGA022518 I
BGIOSGA005516 Oryza indica BGIOSGA005516 I
OGLUM06G07170 Oryza glumaepatula OGLUM06G07170 I
ORUFI06G07050 Oryza rufipogon ORUFI06G07050 I
ORUFI02G35820 Oryza rufipogon ORUFI02G35820 I
ORGLA06G0063300 Oryza glaberrima ORGLA06G0063300 I
ORGLA02G0296600 Oryza glaberrima ORGLA02G0296600 I
OPUNC06G06450 Oryza punctata OPUNC06G06450 I
OPUNC02G31650 Oryza punctata OPUNC02G31650 I
ONIVA06G08110 Oryza nivara ONIVA06G08110 I
ONIVA02G36360 Oryza nivara ONIVA02G36360 I
OMERI06G07980 Oryza meridionalis OMERI06G07980 I
OMERI02G32570 Oryza meridionalis OMERI02G32570 I
GSMUA_Achr9G15730_001 Musa acuminata GSMUA_Achr9G15730_001 I
OGLUM02G35430 Oryza glumaepatula OGLUM02G35430 I
OBART06G06800 Oryza barthii OBART06G06800 I
OB06G16230 Oryza brachyantha OB06G16230 I
MTR_7g093360 Medicago truncatula MTR_7g093360 I
MTR_7g093350 Medicago truncatula MTR_7g093350 I
MTR_1g054175 Medicago truncatula MTR_1g054175 I
MLOC_17575 Hordeum vulgare MLOC_17575 I
LPERR06G06210 Leersia perrieri LPERR06G06210 I
LPERR02G28190 Leersia perrieri LPERR02G28190 I
GRMZM2G134552 Zea mays GRMZM2G134552 N