bhlhe41 (Oryzias latipes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSORLG00000011401 T036429_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.889 0.944
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.889 0.944
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.889 0.944
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.889 0.944
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.889 0.944
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.889 0.944
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.889 0.944
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.889 0.926
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.889 0.926
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.889 0.926
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.889 0.926
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.889 0.926
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.889 0.926
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.889 0.926
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.889 0.926
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.889 0.926
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.889 0.926
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.889 0.926
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.889 0.926
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.889 0.926
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.889 0.926
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.889 0.926
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000014277 bHLH 48 102

Links

Other bHLH family TFs
Other Oryzias latipes TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK05128.1 Cannabis sativa PK05128.1 D
Pm003522 Prunus mume Pm003522 I
chr5.LjT29J15.10.nc Lotus japonicus chr5.LjT29J15.10.nc I
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I
Eucgr.H04338 Eucalyptus grandis Eucgr.H04338 I
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I
mgf012838m Mimulus guttatus mgf012838m I
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I
Cucsa.388800 Cucumis sativus Cucsa.388800 I
Cucsa.289120 Cucumis sativus Cucsa.289120 I
Cucsa.133290 Cucumis sativus Cucsa.133290 I
GLYMA03G40730 Glycine max GLYMA03G40730 I
Cla020112 Citrullus lanatus Cla020112 I
Cla015037 Citrullus lanatus Cla015037 I
Ca_03753 Cicer arietinum Ca_03753 I
BZO2H3 Vitis vinifera VIT_14s0030g02200 I
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I
SELMODRAFT_439017 Selaginella moellendorffii SELMODRAFT_439017 I
SELMODRAFT_270282 Selaginella moellendorffii SELMODRAFT_270282 I
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I
MTR_1g080920 Medicago truncatula MTR_1g080920 I
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I
GLYMA20G36750 Glycine max GLYMA20G36750 I
GLYMA19G43420 Glycine max GLYMA19G43420 I
GLYMA10G30410 Glycine max GLYMA10G30410 I