CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MSGN1
(
Pteropus vampyrus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSPVAG00000015666
T037155_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MSGN1
M04144_2.00
Homo sapiens
NVMCAWWTGGYN
NRCCAWWTGKBN
SELEX
Yin et al.(2017)
MSGN1_eDBD_HT-SELEX
0.914
1.000
Msgn1
M08772_2.00
Mus musculus
NNRMCAAATGGY
RCCATTTGKYNN
Misc
Kulakovskiy et al.(2013)
MSGN1_MOUSE.H11MO.0.C
0.914
1.000
MSGN1
M04145_2.00
Homo sapiens
NRMCAWWTGSYN
NRSCAWWTGKYN
SELEX
Yin et al.(2017)
MSGN1_eDBD_Methyl-HT-SELEX
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000014773
bHLH
126
180
RRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGELT
Links
Other
bHLH
family TFs
Other
Pteropus vampyrus
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
XP_002163918.1
Hydra magnipapillata
XP_002163918.1
I
0.000
AMSG_09450
Thecamonas trahens
AMSG_09450
N
0.000
CAOG_02676
Capsaspora owczarzaki
CAOG_02676
N
0.000
PTSG_02585
Salpingoeca rosetta
PTSG_02585
N
0.000
ACEP23223
Atta cephalotes
ACEP23223
N
0.000
CapteG178344
Capitella teleta
CapteG178344
N
0.000
CGI_10027770
Crassostrea gigas
CGI_10027770
N
0.000
DAPPUDRAFT_306626
Daphnia pulex
DAPPUDRAFT_306626
N
0.000
GSTUM_00007488001
Tuber melanosporum
GSTUM_00007488001
N
0.000
LotgiG105193
Lottia gigantea
LotgiG105193
N
0.000
OIDMADRAFT_54116
Oidiodendron maius
OIDMADRAFT_54116
N
0.000
SOCG_00309
Schizosaccharomyces octosporus
SOCG_00309
N
0.000
SPBC19G7.04
Schizosaccharomyces pombe
SPBC19G7.04
N
0.000
SPOG_02196
Schizosaccharomyces cryophilus
SPOG_02196
N
0.000
V565_033960
Rhizoctonia solani
V565_033960
N
0.000
Cflo_06149--XP_001122099.1_APIME
Camponotus floridanus
Cflo_06149--XP_001122099.1_APIME
N
0.000