CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ARNTL2
(
Sus scrofa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSSSCG00000000551
T037384_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000000581
bHLH
1
54
LREAHSQTEKRRRDKMNNLIETLSAMIPQCHPVARKLDKLTVLRMAVQHLRSLK
Links
Other
bHLH
family TFs
Other
Sus scrofa
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC233899.1_FG002
Zea mays
AC233899.1_FG002
N
0.000
AMTR_s00089p00043950
Amborella trichopoda
AMTR_s00089p00043950
N
0.000
BHLH70
Arabidopsis thaliana
AT2G46810
N
0.000
FAMA
Arabidopsis thaliana
AT3G24140
N
0.000
BHLH67
Arabidopsis thaliana
AT3G61950
N
0.000
BGIOSGA005582
Oryza indica
BGIOSGA005582
N
0.000
BGIOSGA008846
Oryza indica
BGIOSGA008846
N
0.000
BGIOSGA012015
Oryza indica
BGIOSGA012015
N
0.000
BGIOSGA017025
Oryza indica
BGIOSGA017025
N
0.000
BGIOSGA017471
Oryza indica
BGIOSGA017471
N
0.000
BGIOSGA020491
Oryza indica
BGIOSGA020491
N
0.000
BGIOSGA032814
Oryza indica
BGIOSGA032814
N
0.000
Bo1g101110
Brassica oleracea
Bo1g101110
N
0.000
Bo2g075510
Brassica oleracea
Bo2g075510
N
0.000
Bo3g082010
Brassica oleracea
Bo3g082010
N
0.000
Bo4g006950
Brassica oleracea
Bo4g006950
N
0.000
Bo4g197360
Brassica oleracea
Bo4g197360
N
0.000
Bo7g037540
Brassica oleracea
Bo7g037540
N
0.000
Bo8g097470
Brassica oleracea
Bo8g097470
N
0.000
Bo9g055890
Brassica oleracea
Bo9g055890
N
0.000
Bra001929
Brassica rapa
Bra001929
N
0.000
Bra004505
Brassica rapa
Bra004505
N
0.000
Bra007644
Brassica rapa
Bra007644
N
0.000
Bra008017
Brassica rapa
Bra008017
N
0.000
Bra027958
Brassica rapa
Bra027958
N
0.000
Bra028357
Brassica rapa
Bra028357
N
0.000
Bra040483
Brassica rapa
Bra040483
N
0.000
BRADI1G71990
Brachypodium distachyon
BRADI1G71990
N
0.000
BRADI2G22810
Brachypodium distachyon
BRADI2G22810
N
0.000
BRADI3G38510
Brachypodium distachyon
BRADI3G38510
N
0.000
BRADI3G52150
Brachypodium distachyon
BRADI3G52150
N
0.000
BRADI3G58360
Brachypodium distachyon
BRADI3G58360
N
0.000
BRADI5G19950
Brachypodium distachyon
BRADI5G19950
N
0.000
F775_02125
Aegilops tauschii
F775_02125
N
0.000
F775_03517
Aegilops tauschii
F775_03517
N
0.000
F775_11253
Aegilops tauschii
F775_11253
N
0.000
fgenesh1_pm.C_scaffold_6002861
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002861
N
0.000
fgenesh2_kg.5__2692__AT3G61950.1
Arabidopsis lyrata
fgenesh2_kg.5__2692__AT3G61950.1
N
0.000
GLYMA01G23230
Glycine max
GLYMA01G23230
N
0.000
GLYMA02G14290
Glycine max
GLYMA02G14290
N
0.000
GLYMA06G35330
Glycine max
GLYMA06G35330
N
0.000
GLYMA07G05500
Glycine max
GLYMA07G05500
N
0.000
GLYMA08G36590
Glycine max
GLYMA08G36590
N
0.000
GLYMA16G02020
Glycine max
GLYMA16G02020
N
0.000
GRMZM2G008691
Zea mays
GRMZM2G008691
N
0.000
GRMZM2G045883
Zea mays
GRMZM2G045883
N
0.000
GRMZM2G086474
Zea mays
GRMZM2G086474
N
0.000
GRMZM2G091003
Zea mays
GRMZM2G091003
N
0.000
GRMZM2G111146
Zea mays
GRMZM2G111146
N
0.000
GRMZM2G162450
Zea mays
GRMZM2G162450
N
0.000
GSMUA_Achr11G00350_001
Musa acuminata
GSMUA_Achr11G00350_001
N
0.000
GSMUA_Achr11G02740_001
Musa acuminata
GSMUA_Achr11G02740_001
N
0.000
GSMUA_Achr11G23340_001
Musa acuminata
GSMUA_Achr11G23340_001
N
0.000
GSMUA_Achr2G06030_001
Musa acuminata
GSMUA_Achr2G06030_001
N
0.000
GSMUA_Achr2G22310_001
Musa acuminata
GSMUA_Achr2G22310_001
N
0.000
GSMUA_Achr6G10290_001
Musa acuminata
GSMUA_Achr6G10290_001
N
0.000
GSMUA_Achr8G12330_001
Musa acuminata
GSMUA_Achr8G12330_001
N
0.000
GSMUA_Achr8G28400_001
Musa acuminata
GSMUA_Achr8G28400_001
N
0.000
LPERR02G23260
Leersia perrieri
LPERR02G23260
N
0.000
LPERR02G27220
Leersia perrieri
LPERR02G27220
N
0.000
LPERR03G05820
Leersia perrieri
LPERR03G05820
N
0.000
LPERR04G19210
Leersia perrieri
LPERR04G19210
N
0.000
LPERR05G23220
Leersia perrieri
LPERR05G23220
N
0.000
LPERR09G09700
Leersia perrieri
LPERR09G09700
N
0.000
LPERR10G05620
Leersia perrieri
LPERR10G05620
N
0.000
MLOC_10595
Hordeum vulgare
MLOC_10595
N
0.000
MLOC_45114
Hordeum vulgare
MLOC_45114
N
0.000
MLOC_60291
Hordeum vulgare
MLOC_60291
N
0.000
MLOC_67091
Hordeum vulgare
MLOC_67091
N
0.000
MLOC_67417
Hordeum vulgare
MLOC_67417
N
0.000
MTR_0194s0050
Medicago truncatula
MTR_0194s0050
N
0.000
MTR_8g024210
Medicago truncatula
MTR_8g024210
N
0.000
MTR_8g066770
Medicago truncatula
MTR_8g066770
N
0.000
OB02G35790
Oryza brachyantha
OB02G35790
N
0.000
OB02G40170
Oryza brachyantha
OB02G40170
N
0.000
OB03G16590
Oryza brachyantha
OB03G16590
N
0.000
OB04G30380
Oryza brachyantha
OB04G30380
N
0.000
OB05G34990
Oryza brachyantha
OB05G34990
N
0.000
OB10G16200
Oryza brachyantha
OB10G16200
N
0.000
OBART02G28630
Oryza barthii
OBART02G28630
N
0.000
OBART02G33270
Oryza barthii
OBART02G33270
N
0.000
OBART03G06470
Oryza barthii
OBART03G06470
N
0.000
OBART04G23490
Oryza barthii
OBART04G23490
N
0.000
OBART05G27490
Oryza barthii
OBART05G27490
N
0.000
OBART05G28280
Oryza barthii
OBART05G28280
N
0.000
OBART10G08120
Oryza barthii
OBART10G08120
N
0.000
OGLUM02G33770
Oryza glumaepatula
OGLUM02G33770
N
0.000
OGLUM03G06480
Oryza glumaepatula
OGLUM03G06480
N
0.000
OGLUM04G23410
Oryza glumaepatula
OGLUM04G23410
N
0.000
OGLUM05G29000
Oryza glumaepatula
OGLUM05G29000
N
0.000
OGLUM05G29710
Oryza glumaepatula
OGLUM05G29710
N
0.000
OGLUM10G07850
Oryza glumaepatula
OGLUM10G07850
N
0.000
OLONG_001045
Oryza longistaminata
OLONG_001045
N
0.000
OLONG_006958
Oryza longistaminata
OLONG_006958
N
0.000
OLONG_028191
Oryza longistaminata
OLONG_028191
N
0.000
OMERI02G31750
Oryza meridionalis
OMERI02G31750
N
0.000
OMERI03G01350
Oryza meridionalis
OMERI03G01350
N
0.000
OMERI03G06350
Oryza meridionalis
OMERI03G06350
N
0.000
OMERI05G23490
Oryza meridionalis
OMERI05G23490
N
0.000
ONIVA02G06380
Oryza nivara
ONIVA02G06380
N
0.000
ONIVA02G35790
Oryza nivara
ONIVA02G35790
N
0.000
ONIVA04G03690
Oryza nivara
ONIVA04G03690
N
0.000
ONIVA04G22720
Oryza nivara
ONIVA04G22720
N
0.000
ONIVA05G29540
Oryza nivara
ONIVA05G29540
N
0.000
ONIVA05G30250
Oryza nivara
ONIVA05G30250
N
0.000
ONIVA10G07810
Oryza nivara
ONIVA10G07810
N
0.000
OPUNC02G26270
Oryza punctata
OPUNC02G26270
N
0.000
OPUNC02G30580
Oryza punctata
OPUNC02G30580
N
0.000
OPUNC03G06240
Oryza punctata
OPUNC03G06240
N
0.000
OPUNC04G21010
Oryza punctata
OPUNC04G21010
N
0.000
OPUNC05G25080
Oryza punctata
OPUNC05G25080
N
0.000
OPUNC05G25820
Oryza punctata
OPUNC05G25820
N
0.000
OPUNC10G07050
Oryza punctata
OPUNC10G07050
N
0.000
ORGLA02G0246400
Oryza glaberrima
ORGLA02G0246400
N
0.000
ORGLA02G0287300
Oryza glaberrima
ORGLA02G0287300
N
0.000
ORGLA03G0062600
Oryza glaberrima
ORGLA03G0062600
N
0.000
ORGLA04G0200200
Oryza glaberrima
ORGLA04G0200200
N
0.000
ORGLA05G0238800
Oryza glaberrima
ORGLA05G0238800
N
0.000
ORGLA05G0246000
Oryza glaberrima
ORGLA05G0246000
N
0.000
ORGLA10G0067600
Oryza glaberrima
ORGLA10G0067600
N
0.000
ORUFI02G30170
Oryza rufipogon
ORUFI02G30170
N
0.000
ORUFI02G34810
Oryza rufipogon
ORUFI02G34810
N
0.000
ORUFI03G06370
Oryza rufipogon
ORUFI03G06370
N
0.000
ORUFI04G25160
Oryza rufipogon
ORUFI04G25160
N
0.000
ORUFI05G29450
Oryza rufipogon
ORUFI05G29450
N
0.000
ORUFI05G30290
Oryza rufipogon
ORUFI05G30290
N
0.000
ORUFI10G08570
Oryza rufipogon
ORUFI10G08570
N
0.000
OS02G0691500
Oryza sativa
OS02G0691500
N
0.000
OS03G0188400
Oryza sativa
OS03G0188400
N
0.000
OS05G0586300
Oryza sativa
OS05G0586300
N
0.000
OS05G0597000
Oryza sativa
OS05G0597000
N
0.000
OS10G0376900
Oryza sativa
OS10G0376900
N
0.000
PGSC0003DMG400015760
Solanum tuberosum
PGSC0003DMG400015760
N
0.000
PGSC0003DMG400016145
Solanum tuberosum
PGSC0003DMG400016145
N
0.000
PGSC0003DMG400017540
Solanum tuberosum
PGSC0003DMG400017540
N
0.000
PGSC0003DMG400017766
Solanum tuberosum
PGSC0003DMG400017766
N
0.000
PGSC0003DMG400029634
Solanum tuberosum
PGSC0003DMG400029634
N
0.000
POPTR_0001s32160
Populus trichocarpa
POPTR_0001s32160
N
0.000
POPTR_0002s18100
Populus trichocarpa
POPTR_0002s18100
N
0.000
POPTR_0017s08160
Populus trichocarpa
POPTR_0017s08160
N
0.000
PRUPE_ppa006041mg
Prunus persica
PRUPE_ppa006041mg
N
0.000
PRUPE_ppa017746mg
Prunus persica
PRUPE_ppa017746mg
N
0.000
PRUPE_ppa020429mg
Prunus persica
PRUPE_ppa020429mg
N
0.000
PRUPE_ppa020862mg
Prunus persica
PRUPE_ppa020862mg
N
0.000
Sb0012s004780
Sorghum bicolor
Sb0012s004780
N
0.000
Sb01g044640
Sorghum bicolor
Sb01g044640
N
0.000
Sb04g027280
Sorghum bicolor
Sb04g027280
N
0.000
Sb04g031250
Sorghum bicolor
Sb04g031250
N
0.000
Sb09g030060
Sorghum bicolor
Sb09g030060
N
0.000
FMA
Arabidopsis lyrata
scaffold_302925.1
N
0.000
scaffold_403653.1
Arabidopsis lyrata
scaffold_403653.1
N
0.000
SELMODRAFT_410402
Selaginella moellendorffii
SELMODRAFT_410402
N
0.000
SELMODRAFT_428659
Selaginella moellendorffii
SELMODRAFT_428659
N
0.000
SELMODRAFT_430716
Selaginella moellendorffii
SELMODRAFT_430716
N
0.000
SELMODRAFT_451148
Selaginella moellendorffii
SELMODRAFT_451148
N
0.000
Si007984m.g
Setaria italica
Si007984m.g
N
0.000
Si010485m.g
Setaria italica
Si010485m.g
N
0.000
Si017701m.g
Setaria italica
Si017701m.g
N
0.000
Si017715m.g
Setaria italica
Si017715m.g
N
0.000
Si021834m.g
Setaria italica
Si021834m.g
N
0.000
Si036568m.g
Setaria italica
Si036568m.g
N
0.000
Si038653m.g
Setaria italica
Si038653m.g
N
0.000
Solyc01g098720.2
Solanum lycopersicum
Solyc01g098720.2
N
0.000
Solyc05g053660.1
Solanum lycopersicum
Solyc05g053660.1
N
0.000
Solyc08g076820.2
Solanum lycopersicum
Solyc08g076820.2
N
0.000
Solyc09g091760.1
Solanum lycopersicum
Solyc09g091760.1
N
0.000
Solyc11g010340.1
Solanum lycopersicum
Solyc11g010340.1
N
0.000
TCM_001031
Theobroma cacao
TCM_001031
N
0.000
TCM_005028
Theobroma cacao
TCM_005028
N
0.000
TCM_015694
Theobroma cacao
TCM_015694
N
0.000
TCM_020336
Theobroma cacao
TCM_020336
N
0.000
Traes_2BL_E58521BDF
Triticum aestivum
Traes_2BL_E58521BDF
N
0.000
Traes_2BS_EE97B0B15
Triticum aestivum
Traes_2BS_EE97B0B15
N
0.000
Traes_4AL_EE88645E2
Triticum aestivum
Traes_4AL_EE88645E2
N
0.000
Traes_4BL_A48C29364
Triticum aestivum
Traes_4BL_A48C29364
N
0.000
Traes_4DL_A76BE77E4
Triticum aestivum
Traes_4DL_A76BE77E4
N
0.000
Traes_6DL_882BC1812
Triticum aestivum
Traes_6DL_882BC1812
N
0.000
bHLH071
Vitis vinifera
VIT_02s0012g01450
N
0.000
FMA
Vitis vinifera
VIT_05s0029g00050
N
0.000
VIT_07s0191g00240
Vitis vinifera
VIT_07s0191g00240
N
0.000
VIT_15s0048g02510
Vitis vinifera
VIT_15s0048g02510
N
0.000
Ca_12363
Cicer arietinum
Ca_12363
N
0.000
Ca_16010
Cicer arietinum
Ca_16010
N
0.000
Ca_22410
Cicer arietinum
Ca_22410
N
0.000
Cla021373
Citrullus lanatus
Cla021373
N
0.000
Cla021744
Citrullus lanatus
Cla021744
N
0.000
Pm002111
Prunus mume
Pm002111
N
0.000
Pm009474
Prunus mume
Pm009474
N
0.000
Pm023207
Prunus mume
Pm023207
N
0.000
Pm028748
Prunus mume
Pm028748
N
0.000
29904.m002956
Ricinus communis
29904.m002956
N
0.000
30054.m000819
Ricinus communis
30054.m000819
N
0.000
30076.m004456
Ricinus communis
30076.m004456
N
0.000
cassava27750.m1
Manihot esculenta
cassava27750.m1
N
0.000
cassava27856.m1
Manihot esculenta
cassava27856.m1
N
0.000
cassava29786.valid.m1
Manihot esculenta
cassava29786.valid.m1
N
0.000
cassava34492.m1
Manihot esculenta
cassava34492.m1
N
0.000
cassava39415.m1
Manihot esculenta
cassava39415.m1
N
0.000
Cucsa.256420
Cucumis sativus
Cucsa.256420
N
0.000
Cucsa.260110
Cucumis sativus
Cucsa.260110
N
0.000
mgf015694m
Mimulus guttatus
mgf015694m
N
0.000
mgf017530m
Mimulus guttatus
mgf017530m
N
0.000
Aquca_034_00130
Aquilegia coerulea
Aquca_034_00130
N
0.000
Bostr.13158s0200
Boechera stricta
Bostr.13158s0200
N
0.000
Bostr.19424s0222
Boechera stricta
Bostr.19424s0222
N
0.000
Bostr.25993s0085
Boechera stricta
Bostr.25993s0085
N
0.000
Cagra.0026s0026
Capsella grandiflora
Cagra.0026s0026
N
0.000
Cagra.0050s0019
Capsella grandiflora
Cagra.0050s0019
N
0.000
Cagra.0483s0048
Capsella grandiflora
Cagra.0483s0048
N
0.000
Carubv10013821m.g
Capsella rubella
Carubv10013821m.g
N
0.000
Carubv10018614m.g
Capsella rubella
Carubv10018614m.g
N
0.000
Carubv10023506m.g
Capsella rubella
Carubv10023506m.g
N
0.000
Ciclev10005031m.g
Citrus clementina
Ciclev10005031m.g
N
0.000
Ciclev10020360m.g
Citrus clementina
Ciclev10020360m.g
N
0.000
Eucgr.E00273
Eucalyptus grandis
Eucgr.E00273
N
0.000
Eucgr.H02788
Eucalyptus grandis
Eucgr.H02788
N
0.000
Eucgr.H04738
Eucalyptus grandis
Eucgr.H04738
N
0.000
evm.TU.supercontig_57.85
Carica papaya
evm.TU.supercontig_57.85
N
0.000
evm.TU.supercontig_59.132
Carica papaya
evm.TU.supercontig_59.132
N
0.000
gene02199-v1.0-hybrid
Fragaria vesca
gene02199-v1.0-hybrid
N
0.000
gene12030-v1.0-hybrid
Fragaria vesca
gene12030-v1.0-hybrid
N
0.000
gene18608-v1.0-hybrid
Fragaria vesca
gene18608-v1.0-hybrid
N
0.000
gene18888-v1.0-hybrid
Fragaria vesca
gene18888-v1.0-hybrid
N
0.000
Gorai.003G041800
Gossypium raimondii
Gorai.003G041800
N
0.000
Gorai.004G243100
Gossypium raimondii
Gorai.004G243100
N
0.000
Gorai.006G217200
Gossypium raimondii
Gorai.006G217200
N
0.000
Gorai.007G113200
Gossypium raimondii
Gorai.007G113200
N
0.000
Gorai.007G113300
Gossypium raimondii
Gorai.007G113300
N
0.000
Gorai.007G294800
Gossypium raimondii
Gorai.007G294800
N
0.000
Gorai.008G225800
Gossypium raimondii
Gorai.008G225800
N
0.000
Gorai.011G110900
Gossypium raimondii
Gorai.011G110900
N
0.000
Gorai.011G159100
Gossypium raimondii
Gorai.011G159100
N
0.000
Lus10010101.g
Linum usitatissimum
Lus10010101.g
N
0.000
Lus10012603.g
Linum usitatissimum
Lus10012603.g
N
0.000
Lus10016680.g
Linum usitatissimum
Lus10016680.g
N
0.000
MDP0000321049
Malus domestica
MDP0000321049
N
0.000
MDP0000646823
Malus domestica
MDP0000646823
N
0.000
MDP0000794913
Malus domestica
MDP0000794913
N
0.000
MDP0000829998
Malus domestica
MDP0000829998
N
0.000
orange1.1g013752m.g
Citrus sinensis
orange1.1g013752m.g
N
0.000
orange1.1g014477m.g
Citrus sinensis
orange1.1g014477m.g
N
0.000
Pavir.Aa00538
Panicum virgatum
Pavir.Aa00538
N
0.000
Pavir.Ab02502
Panicum virgatum
Pavir.Ab02502
N
0.000
Pavir.Db01842
Panicum virgatum
Pavir.Db01842
N
0.000
Pavir.Fb01393
Panicum virgatum
Pavir.Fb01393
N
0.000
Pavir.Ga00771
Panicum virgatum
Pavir.Ga00771
N
0.000
Pavir.Ia02758
Panicum virgatum
Pavir.Ia02758
N
0.000
Pavir.Ia03109
Panicum virgatum
Pavir.Ia03109
N
0.000
Pavir.Ia04907
Panicum virgatum
Pavir.Ia04907
N
0.000
Pavir.Ib02778
Panicum virgatum
Pavir.Ib02778
N
0.000
Pavir.J03740
Panicum virgatum
Pavir.J03740
N
0.000
Pavir.J04021
Panicum virgatum
Pavir.J04021
N
0.000
Pavir.J15346
Panicum virgatum
Pavir.J15346
N
0.000
Pavir.J25730
Panicum virgatum
Pavir.J25730
N
0.000
Pavir.J40759
Panicum virgatum
Pavir.J40759
N
0.000
SapurV1A.0003s0430
Salix purpurea
SapurV1A.0003s0430
N
0.000
SapurV1A.0058s0640
Salix purpurea
SapurV1A.0058s0640
N
0.000
SapurV1A.0462s0070
Salix purpurea
SapurV1A.0462s0070
N
0.000
Thhalv10001803m.g
Eutrema salsugineum
Thhalv10001803m.g
N
0.000
Thhalv10002558m.g
Eutrema salsugineum
Thhalv10002558m.g
N
0.000
Thhalv10006045m.g
Eutrema salsugineum
Thhalv10006045m.g
N
0.000
PK04856.1
Cannabis sativa
PK04856.1
N
0.000
PK27921.1
Cannabis sativa
PK27921.1
N
0.000
PK28391.1
Cannabis sativa
PK28391.1
N
0.000
chr3.CM0208.290.nc
Lotus japonicus
chr3.CM0208.290.nc
N
0.000