Bo4g006950 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo4g006950 T031151_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g006950.1 bHLH 154 205

Links

Other bHLH family TFs
Other Brassica oleracea TFs

234 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_403653.1 Arabidopsis lyrata scaffold_403653.1 N 0.911
Bostr.25993s0085 Boechera stricta Bostr.25993s0085 N 0.911
AC233899.1_FG002 Zea mays AC233899.1_FG002 N 0.892
BGIOSGA005582 Oryza indica BGIOSGA005582 N 0.892
BGIOSGA032814 Oryza indica BGIOSGA032814 N 0.892
BRADI1G71990 Brachypodium distachyon BRADI1G71990 N 0.892
BRADI3G38510 Brachypodium distachyon BRADI3G38510 N 0.892
BRADI3G58360 Brachypodium distachyon BRADI3G58360 N 0.892
GRMZM2G008691 Zea mays GRMZM2G008691 N 0.892
GRMZM2G045883 Zea mays GRMZM2G045883 N 0.892
LPERR02G27220 Leersia perrieri LPERR02G27220 N 0.892
LPERR10G05620 Leersia perrieri LPERR10G05620 N 0.892
OB02G40170 Oryza brachyantha OB02G40170 N 0.892
OB03G16590 Oryza brachyantha OB03G16590 N 0.892
OB10G16200 Oryza brachyantha OB10G16200 N 0.892
OBART02G33270 Oryza barthii OBART02G33270 N 0.892
OBART10G08120 Oryza barthii OBART10G08120 N 0.892
OGLUM02G33770 Oryza glumaepatula OGLUM02G33770 N 0.892
OGLUM10G07850 Oryza glumaepatula OGLUM10G07850 N 0.892
OMERI02G31750 Oryza meridionalis OMERI02G31750 N 0.892
ONIVA02G35790 Oryza nivara ONIVA02G35790 N 0.892
ONIVA10G07810 Oryza nivara ONIVA10G07810 N 0.892
OPUNC02G30580 Oryza punctata OPUNC02G30580 N 0.892
OPUNC03G06240 Oryza punctata OPUNC03G06240 N 0.892
OPUNC10G07050 Oryza punctata OPUNC10G07050 N 0.892
ORGLA02G0287300 Oryza glaberrima ORGLA02G0287300 N 0.892
ORGLA10G0067600 Oryza glaberrima ORGLA10G0067600 N 0.892
ORUFI02G34810 Oryza rufipogon ORUFI02G34810 N 0.892
ORUFI10G08570 Oryza rufipogon ORUFI10G08570 N 0.892
OS10G0376900 Oryza sativa OS10G0376900 N 0.892
PGSC0003DMG400016145 Solanum tuberosum PGSC0003DMG400016145 N 0.892
Sb0012s004780 Sorghum bicolor Sb0012s004780 N 0.892
Sb01g044640 Sorghum bicolor Sb01g044640 N 0.892
Sb04g027280 Sorghum bicolor Sb04g027280 N 0.892
Si017701m.g Setaria italica Si017701m.g N 0.892
Si036568m.g Setaria italica Si036568m.g N 0.892
Si038653m.g Setaria italica Si038653m.g N 0.892
Solyc11g010340.1 Solanum lycopersicum Solyc11g010340.1 N 0.892
TCM_005028 Theobroma cacao TCM_005028 N 0.892
Gorai.007G113200 Gossypium raimondii Gorai.007G113200 N 0.892
Gorai.007G113300 Gossypium raimondii Gorai.007G113300 N 0.892
Pavir.Aa00538 Panicum virgatum Pavir.Aa00538 N 0.892
Pavir.Ia02758 Panicum virgatum Pavir.Ia02758 N 0.892
Pavir.Ia03109 Panicum virgatum Pavir.Ia03109 N 0.892
Pavir.Ia04907 Panicum virgatum Pavir.Ia04907 N 0.892
Pavir.Ib02778 Panicum virgatum Pavir.Ib02778 N 0.892
Pavir.J40759 Panicum virgatum Pavir.J40759 N 0.892
GLYMA07G05500 Glycine max GLYMA07G05500 N 0.889
GLYMA16G02020 Glycine max GLYMA16G02020 N 0.889
Ca_22410 Cicer arietinum Ca_22410 N 0.889
30076.m004456 Ricinus communis 30076.m004456 N 0.889
cassava29786.valid.m1 Manihot esculenta cassava29786.valid.m1 N 0.889
Ciclev10020360m.g Citrus clementina Ciclev10020360m.g N 0.889
evm.TU.supercontig_57.85 Carica papaya evm.TU.supercontig_57.85 N 0.889
gene18608-v1.0-hybrid Fragaria vesca gene18608-v1.0-hybrid N 0.889
Lus10010101.g Linum usitatissimum Lus10010101.g N 0.889
Lus10012603.g Linum usitatissimum Lus10012603.g N 0.889
orange1.1g013752m.g Citrus sinensis orange1.1g013752m.g N 0.889
Pavir.Db01842 Panicum virgatum Pavir.Db01842 N 0.889
chr3.CM0208.290.nc Lotus japonicus chr3.CM0208.290.nc N 0.889
Bra004505 Brassica rapa Bra004505 N 0.884
BHLH70 Arabidopsis thaliana AT2G46810 N 0.881
Bo4g197360 Brassica oleracea Bo4g197360 N 0.881
Bra040483 Brassica rapa Bra040483 N 0.881
Cagra.0050s0019 Capsella grandiflora Cagra.0050s0019 N 0.881
Carubv10023506m.g Capsella rubella Carubv10023506m.g N 0.881
Thhalv10001803m.g Eutrema salsugineum Thhalv10001803m.g N 0.881
BHLH67 Arabidopsis thaliana AT3G61950 N 0.877
Bo8g097470 Brassica oleracea Bo8g097470 N 0.877
Bra007644 Brassica rapa Bra007644 N 0.877
fgenesh2_kg.5__2692__AT3G61950.1 Arabidopsis lyrata fgenesh2_kg.5__2692__AT3G61950.1 N 0.877
Bostr.13158s0200 Boechera stricta Bostr.13158s0200 N 0.877
Cagra.0483s0048 Capsella grandiflora Cagra.0483s0048 N 0.877
Carubv10018614m.g Capsella rubella Carubv10018614m.g N 0.877
Thhalv10006045m.g Eutrema salsugineum Thhalv10006045m.g N 0.877
BHLH96 Arabidopsis thaliana AT1G72210 N 0.868
BGIOSGA030936 Oryza indica BGIOSGA030936 N 0.868
Bo2g075510 Brassica oleracea Bo2g075510 N 0.868
Bo6g092570 Brassica oleracea Bo6g092570 N 0.868
Bra003886 Brassica rapa Bra003886 N 0.868
Bra008017 Brassica rapa Bra008017 N 0.868
Bra016080 Brassica rapa Bra016080 N 0.868
GLYMA02G37313 Glycine max GLYMA02G37313 N 0.868
GLYMA14G35560 Glycine max GLYMA14G35560 N 0.868
GRMZM2G082586 Zea mays GRMZM2G082586 N 0.868
GSMUA_Achr8G17650_001 Musa acuminata GSMUA_Achr8G17650_001 N 0.868
LPERR09G09700 Leersia perrieri LPERR09G09700 N 0.868
MLOC_21759 Hordeum vulgare MLOC_21759 N 0.868
OB09G19960 Oryza brachyantha OB09G19960 N 0.868
OMERI09G10430 Oryza meridionalis OMERI09G10430 N 0.868
ONIVA09G13890 Oryza nivara ONIVA09G13890 N 0.868
OPUNC09G11790 Oryza punctata OPUNC09G11790 N 0.868
ORGLA09G0101900 Oryza glaberrima ORGLA09G0101900 N 0.868
ORUFI09G14410 Oryza rufipogon ORUFI09G14410 N 0.868
OS09G0468700 Oryza sativa OS09G0468700 N 0.868
POPTR_0002s10230 Populus trichocarpa POPTR_0002s10230 N 0.868
Sb02g027210 Sorghum bicolor Sb02g027210 N 0.868
TCM_034439 Theobroma cacao TCM_034439 N 0.868
Traes_5BL_DA72CE20D Triticum aestivum Traes_5BL_DA72CE20D N 0.868
VIT_18s0001g06650 Vitis vinifera VIT_18s0001g06650 N 0.868
cassava31098.valid.m1 Manihot esculenta cassava31098.valid.m1 N 0.868
cassava34492.m1 Manihot esculenta cassava34492.m1 N 0.868
cassava35271.valid.m1 Manihot esculenta cassava35271.valid.m1 N 0.868
Bostr.10273s0131 Boechera stricta Bostr.10273s0131 N 0.868
Cagra.4006s0007 Capsella grandiflora Cagra.4006s0007 N 0.868
Carubv10020657m.g Capsella rubella Carubv10020657m.g N 0.868
Ciclev10001811m.g Citrus clementina Ciclev10001811m.g N 0.868
Ciclev10026131m.g Citrus clementina Ciclev10026131m.g N 0.868
Eucgr.B00048 Eucalyptus grandis Eucgr.B00048 N 0.868
Eucgr.H04738 Eucalyptus grandis Eucgr.H04738 N 0.868
Gorai.005G094800 Gossypium raimondii Gorai.005G094800 N 0.868
Gorai.013G204300 Gossypium raimondii Gorai.013G204300 N 0.868
Lus10015902.g Linum usitatissimum Lus10015902.g N 0.868
orange1.1g020210m.g Citrus sinensis orange1.1g020210m.g N 0.868
orange1.1g043618m.g Citrus sinensis orange1.1g043618m.g N 0.868
Pavir.Bb02386 Panicum virgatum Pavir.Bb02386 N 0.868
Pavir.J22933 Panicum virgatum Pavir.J22933 N 0.868
SapurV1A.0613s0120 Salix purpurea SapurV1A.0613s0120 N 0.868
Thhalv10018867m.g Eutrema salsugineum Thhalv10018867m.g N 0.868
chr1.LjT16B05.110.nd Lotus japonicus chr1.LjT16B05.110.nd N 0.868
fgenesh1_pm.C_scaffold_6002861 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002861 N 0.864
GRMZM2G006631 Zea mays GRMZM2G006631 N 0.864
evm.TU.supercontig_36.191 Carica papaya evm.TU.supercontig_36.191 N 0.864
gene18888-v1.0-hybrid Fragaria vesca gene18888-v1.0-hybrid N 0.864
BHLH57 Arabidopsis thaliana AT4G01460 N 0.861
BGIOSGA008846 Oryza indica BGIOSGA008846 N 0.861
BGIOSGA012015 Oryza indica BGIOSGA012015 N 0.861
BGIOSGA017025 Oryza indica BGIOSGA017025 N 0.861
BGIOSGA017471 Oryza indica BGIOSGA017471 N 0.861
Bo9g004020 Brassica oleracea Bo9g004020 N 0.861
Bra037414 Brassica rapa Bra037414 N 0.861
BRADI2G22810 Brachypodium distachyon BRADI2G22810 N 0.861
BRADI3G52150 Brachypodium distachyon BRADI3G52150 N 0.861
BRADI5G19950 Brachypodium distachyon BRADI5G19950 N 0.861
F775_03517 Aegilops tauschii F775_03517 N 0.861
F775_11253 Aegilops tauschii F775_11253 N 0.861
GRMZM2G091003 Zea mays GRMZM2G091003 N 0.861
GRMZM2G111146 Zea mays GRMZM2G111146 N 0.861
GRMZM2G162450 Zea mays GRMZM2G162450 N 0.861
GSMUA_Achr2G22310_001 Musa acuminata GSMUA_Achr2G22310_001 N 0.861
GSMUA_Achr6G10290_001 Musa acuminata GSMUA_Achr6G10290_001 N 0.861
LPERR02G23260 Leersia perrieri LPERR02G23260 N 0.861
LPERR03G05820 Leersia perrieri LPERR03G05820 N 0.861
LPERR04G19210 Leersia perrieri LPERR04G19210 N 0.861
LPERR05G23220 Leersia perrieri LPERR05G23220 N 0.861
MLOC_10595 Hordeum vulgare MLOC_10595 N 0.861
MLOC_45114 Hordeum vulgare MLOC_45114 N 0.861
MLOC_60291 Hordeum vulgare MLOC_60291 N 0.861
MLOC_67091 Hordeum vulgare MLOC_67091 N 0.861
MLOC_67417 Hordeum vulgare MLOC_67417 N 0.861
OB02G35790 Oryza brachyantha OB02G35790 N 0.861
OB04G30380 Oryza brachyantha OB04G30380 N 0.861
OB05G34990 Oryza brachyantha OB05G34990 N 0.861
OBART02G28630 Oryza barthii OBART02G28630 N 0.861
OBART03G06470 Oryza barthii OBART03G06470 N 0.861
OBART04G23490 Oryza barthii OBART04G23490 N 0.861
OBART05G27490 Oryza barthii OBART05G27490 N 0.861
OGLUM03G06480 Oryza glumaepatula OGLUM03G06480 N 0.861
OGLUM04G23410 Oryza glumaepatula OGLUM04G23410 N 0.861
OGLUM05G29000 Oryza glumaepatula OGLUM05G29000 N 0.861
OLONG_001045 Oryza longistaminata OLONG_001045 N 0.861
OLONG_028191 Oryza longistaminata OLONG_028191 N 0.861
OMERI03G01350 Oryza meridionalis OMERI03G01350 N 0.861
OMERI03G06350 Oryza meridionalis OMERI03G06350 N 0.861
OMERI05G23490 Oryza meridionalis OMERI05G23490 N 0.861
ONIVA02G06380 Oryza nivara ONIVA02G06380 N 0.861
ONIVA04G03690 Oryza nivara ONIVA04G03690 N 0.861
ONIVA04G22720 Oryza nivara ONIVA04G22720 N 0.861
ONIVA05G29540 Oryza nivara ONIVA05G29540 N 0.861
OPUNC02G26270 Oryza punctata OPUNC02G26270 N 0.861
OPUNC04G21010 Oryza punctata OPUNC04G21010 N 0.861
OPUNC05G25080 Oryza punctata OPUNC05G25080 N 0.861
ORGLA02G0246400 Oryza glaberrima ORGLA02G0246400 N 0.861
ORGLA03G0062600 Oryza glaberrima ORGLA03G0062600 N 0.861
ORGLA04G0200200 Oryza glaberrima ORGLA04G0200200 N 0.861
ORGLA05G0238800 Oryza glaberrima ORGLA05G0238800 N 0.861
ORUFI02G30170 Oryza rufipogon ORUFI02G30170 N 0.861
ORUFI03G06370 Oryza rufipogon ORUFI03G06370 N 0.861
ORUFI04G25160 Oryza rufipogon ORUFI04G25160 N 0.861
ORUFI05G29450 Oryza rufipogon ORUFI05G29450 N 0.861
OS02G0691500 Oryza sativa OS02G0691500 N 0.861
OS03G0188400 Oryza sativa OS03G0188400 N 0.861
OS05G0586300 Oryza sativa OS05G0586300 N 0.861
Sb04g031250 Sorghum bicolor Sb04g031250 N 0.861
Sb09g030060 Sorghum bicolor Sb09g030060 N 0.861
Si017715m.g Setaria italica Si017715m.g N 0.861
Si021834m.g Setaria italica Si021834m.g N 0.861
TCM_001031 Theobroma cacao TCM_001031 N 0.861
Traes_2BL_E58521BDF Triticum aestivum Traes_2BL_E58521BDF N 0.861
Traes_4AL_EE88645E2 Triticum aestivum Traes_4AL_EE88645E2 N 0.861
Traes_4BL_A48C29364 Triticum aestivum Traes_4BL_A48C29364 N 0.861
Traes_4DL_A76BE77E4 Triticum aestivum Traes_4DL_A76BE77E4 N 0.861
Traes_6DL_882BC1812 Triticum aestivum Traes_6DL_882BC1812 N 0.861
Bostr.7365s0007 Boechera stricta Bostr.7365s0007 N 0.861
Gorai.003G041800 Gossypium raimondii Gorai.003G041800 N 0.861
Gorai.007G294800 Gossypium raimondii Gorai.007G294800 N 0.861
Pavir.Ab02502 Panicum virgatum Pavir.Ab02502 N 0.861
Pavir.J03740 Panicum virgatum Pavir.J03740 N 0.861
Pavir.J04021 Panicum virgatum Pavir.J04021 N 0.861
Thhalv10028815m.g Eutrema salsugineum Thhalv10028815m.g N 0.861
Si007984m.g Setaria italica Si007984m.g N 0.860
GSMUA_Achr11G00350_001 Musa acuminata GSMUA_Achr11G00350_001 N 0.858
GSMUA_Achr11G23340_001 Musa acuminata GSMUA_Achr11G23340_001 N 0.858
GSMUA_Achr2G06030_001 Musa acuminata GSMUA_Achr2G06030_001 N 0.858
GSMUA_Achr8G28400_001 Musa acuminata GSMUA_Achr8G28400_001 N 0.858
MTR_8g024210 Medicago truncatula MTR_8g024210 N 0.858
PRUPE_ppa006041mg Prunus persica PRUPE_ppa006041mg N 0.858
bHLH071 Vitis vinifera VIT_02s0012g01450 N 0.858
VIT_07s0191g00240 Vitis vinifera VIT_07s0191g00240 N 0.858
VIT_15s0048g02510 Vitis vinifera VIT_15s0048g02510 N 0.858
Pm028748 Prunus mume Pm028748 N 0.858
cassava39415.m1 Manihot esculenta cassava39415.m1 N 0.858
Eucgr.H02788 Eucalyptus grandis Eucgr.H02788 N 0.858
MDP0000229007 Malus domestica MDP0000229007 N 0.858
MDP0000321049 Malus domestica MDP0000321049 N 0.858
MDP0000829998 Malus domestica MDP0000829998 N 0.858
PK21055.1 Cannabis sativa PK21055.1 N 0.858
Ca_28086 Cicer arietinum Ca_28086 N 0.856
mgf017530m Mimulus guttatus mgf017530m N 0.854
POPTR_0002s18100 Populus trichocarpa POPTR_0002s18100 N 0.853
SapurV1A.0003s0430 Salix purpurea SapurV1A.0003s0430 N 0.853
Bo9g055890 Brassica oleracea Bo9g055890 N 0.849
Bra027958 Brassica rapa Bra027958 N 0.849
GRMZM2G086474 Zea mays GRMZM2G086474 N 0.849
Si010485m.g Setaria italica Si010485m.g N 0.849
Pavir.Ga00771 Panicum virgatum Pavir.Ga00771 N 0.849
Pavir.J15346 Panicum virgatum Pavir.J15346 N 0.849
Thhalv10004772m.g Eutrema salsugineum Thhalv10004772m.g N 0.844
Bo6g114730 Brassica oleracea Bo6g114730 N 0.843
MTR_5g064950 Medicago truncatula MTR_5g064950 N 0.843
POPTR_0014s10190 Populus trichocarpa POPTR_0014s10190 N 0.841
SapurV1A.0162s0340 Salix purpurea SapurV1A.0162s0340 N 0.841
BRADI4G32650 Brachypodium distachyon BRADI4G32650 N 0.840
GSMUA_Achr5G17900_001 Musa acuminata GSMUA_Achr5G17900_001 N 0.840