CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10004772m.g
(
Eutrema salsugineum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Thhalv10004772m.g
T051189_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10004772m
bHLH
90
141
QRMNHIAVERNRRRQMNHFLSILKSMMPPSYSQRSDQASIIEGTINYLKKQE
Links
Other
bHLH
family TFs
Other
Eutrema salsugineum
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo00615s100
Brassica oleracea
Bo00615s100
N
0.884
Bra031865
Brassica rapa
Bra031865
N
0.884
AC233899.1_FG002
Zea mays
AC233899.1_FG002
N
0.846
BGIOSGA005582
Oryza indica
BGIOSGA005582
N
0.846
BGIOSGA032814
Oryza indica
BGIOSGA032814
N
0.846
BRADI1G71990
Brachypodium distachyon
BRADI1G71990
N
0.846
BRADI3G38510
Brachypodium distachyon
BRADI3G38510
N
0.846
BRADI3G58360
Brachypodium distachyon
BRADI3G58360
N
0.846
GLYMA07G05500
Glycine max
GLYMA07G05500
N
0.846
GLYMA16G02020
Glycine max
GLYMA16G02020
N
0.846
GRMZM2G045883
Zea mays
GRMZM2G045883
N
0.846
LPERR02G27220
Leersia perrieri
LPERR02G27220
N
0.846
LPERR10G05620
Leersia perrieri
LPERR10G05620
N
0.846
OB02G40170
Oryza brachyantha
OB02G40170
N
0.846
OB03G16590
Oryza brachyantha
OB03G16590
N
0.846
OB10G16200
Oryza brachyantha
OB10G16200
N
0.846
OBART02G33270
Oryza barthii
OBART02G33270
N
0.846
OBART10G08120
Oryza barthii
OBART10G08120
N
0.846
OGLUM02G33770
Oryza glumaepatula
OGLUM02G33770
N
0.846
OGLUM10G07850
Oryza glumaepatula
OGLUM10G07850
N
0.846
OMERI02G31750
Oryza meridionalis
OMERI02G31750
N
0.846
ONIVA02G35790
Oryza nivara
ONIVA02G35790
N
0.846
ONIVA10G07810
Oryza nivara
ONIVA10G07810
N
0.846
OPUNC02G30580
Oryza punctata
OPUNC02G30580
N
0.846
OPUNC03G06240
Oryza punctata
OPUNC03G06240
N
0.846
OPUNC10G07050
Oryza punctata
OPUNC10G07050
N
0.846
ORGLA02G0287300
Oryza glaberrima
ORGLA02G0287300
N
0.846
ORGLA10G0067600
Oryza glaberrima
ORGLA10G0067600
N
0.846
ORUFI02G34810
Oryza rufipogon
ORUFI02G34810
N
0.846
ORUFI10G08570
Oryza rufipogon
ORUFI10G08570
N
0.846
OS10G0376900
Oryza sativa
OS10G0376900
N
0.846
PGSC0003DMG400016145
Solanum tuberosum
PGSC0003DMG400016145
N
0.846
Sb0012s004780
Sorghum bicolor
Sb0012s004780
N
0.846
Sb01g044640
Sorghum bicolor
Sb01g044640
N
0.846
Sb04g027280
Sorghum bicolor
Sb04g027280
N
0.846
Si017701m.g
Setaria italica
Si017701m.g
N
0.846
Si036568m.g
Setaria italica
Si036568m.g
N
0.846
Si038653m.g
Setaria italica
Si038653m.g
N
0.846
Solyc11g010340.1
Solanum lycopersicum
Solyc11g010340.1
N
0.846
TCM_005028
Theobroma cacao
TCM_005028
N
0.846
Ca_22410
Cicer arietinum
Ca_22410
N
0.846
30076.m004456
Ricinus communis
30076.m004456
N
0.846
cassava29786.valid.m1
Manihot esculenta
cassava29786.valid.m1
N
0.846
Ciclev10020360m.g
Citrus clementina
Ciclev10020360m.g
N
0.846
evm.TU.supercontig_57.85
Carica papaya
evm.TU.supercontig_57.85
N
0.846
gene18608-v1.0-hybrid
Fragaria vesca
gene18608-v1.0-hybrid
N
0.846
Gorai.007G113200
Gossypium raimondii
Gorai.007G113200
N
0.846
Gorai.007G113300
Gossypium raimondii
Gorai.007G113300
N
0.846
Lus10010101.g
Linum usitatissimum
Lus10010101.g
N
0.846
Lus10012603.g
Linum usitatissimum
Lus10012603.g
N
0.846
orange1.1g013752m.g
Citrus sinensis
orange1.1g013752m.g
N
0.846
Pavir.Aa00538
Panicum virgatum
Pavir.Aa00538
N
0.846
Pavir.Db01842
Panicum virgatum
Pavir.Db01842
N
0.846
Pavir.Ia02758
Panicum virgatum
Pavir.Ia02758
N
0.846
Pavir.Ia03109
Panicum virgatum
Pavir.Ia03109
N
0.846
Pavir.Ia04907
Panicum virgatum
Pavir.Ia04907
N
0.846
Pavir.Ib02778
Panicum virgatum
Pavir.Ib02778
N
0.846
Pavir.J40759
Panicum virgatum
Pavir.J40759
N
0.846
chr3.CM0208.290.nc
Lotus japonicus
chr3.CM0208.290.nc
N
0.846
Bo4g006950
Brassica oleracea
Bo4g006950
N
0.844
GRMZM2G008691
Zea mays
GRMZM2G008691
N
0.844
scaffold_403653.1
Arabidopsis lyrata
scaffold_403653.1
N
0.844
Bostr.25993s0085
Boechera stricta
Bostr.25993s0085
N
0.844
Lus10015902.g
Linum usitatissimum
Lus10015902.g
N
0.842
Cagra.0917s0051
Capsella grandiflora
Cagra.0917s0051
N
0.840