CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA05G30250
(
Oryza nivara
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ONIVA05G30250
T042656_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA05G30250.1
bHLH
1
50
MSHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQ
Links
Other
bHLH
family TFs
Other
Oryza nivara
TFs
110 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_403653.1
Arabidopsis lyrata
scaffold_403653.1
N
0.000
Bostr.25993s0085
Boechera stricta
Bostr.25993s0085
N
0.000
cassava34492.m1
Manihot esculenta
cassava34492.m1
N
0.000
cassava29786.valid.m1
Manihot esculenta
cassava29786.valid.m1
N
0.858
30076.m004456
Ricinus communis
30076.m004456
N
0.858
Ca_22410
Cicer arietinum
Ca_22410
N
0.858
TCM_005028
Theobroma cacao
TCM_005028
N
0.855
Solyc11g010340.1
Solanum lycopersicum
Solyc11g010340.1
N
0.855
Si040271m.g
Setaria italica
Si040271m.g
N
0.000
Si038653m.g
Setaria italica
Si038653m.g
N
0.000
Si036568m.g
Setaria italica
Si036568m.g
N
0.000
Si017701m.g
Setaria italica
Si017701m.g
N
0.000
Ciclev10020360m.g
Citrus clementina
Ciclev10020360m.g
N
0.858
Sb04g027280
Sorghum bicolor
Sb04g027280
N
0.000
Sb01g049080
Sorghum bicolor
Sb01g049080
N
0.000
Sb01g044640
Sorghum bicolor
Sb01g044640
N
0.000
Sb0012s004780
Sorghum bicolor
Sb0012s004780
N
0.000
POPTR_0014s10190
Populus trichocarpa
POPTR_0014s10190
N
0.000
POPTR_0002s18100
Populus trichocarpa
POPTR_0002s18100
N
0.000
PGSC0003DMG400016145
Solanum tuberosum
PGSC0003DMG400016145
N
0.855
OS10G0376900
Oryza sativa
OS10G0376900
N
0.000
OS03G0122100
Oryza sativa
OS03G0122100
N
0.000
ORUFI10G08570
Oryza rufipogon
ORUFI10G08570
N
0.000
ORUFI03G01470
Oryza rufipogon
ORUFI03G01470
N
0.000
Lus10012603.g
Linum usitatissimum
Lus10012603.g
N
0.000
chr3.CM0208.290.nc
Lotus japonicus
chr3.CM0208.290.nc
N
0.858
SapurV1A.0162s0340
Salix purpurea
SapurV1A.0162s0340
N
0.000
SapurV1A.0003s0430
Salix purpurea
SapurV1A.0003s0430
N
0.000
Pavir.J40759
Panicum virgatum
Pavir.J40759
N
0.000
Pavir.Ib02778
Panicum virgatum
Pavir.Ib02778
N
0.000
Pavir.Ia04907
Panicum virgatum
Pavir.Ia04907
N
0.000
Pavir.Ia03109
Panicum virgatum
Pavir.Ia03109
N
0.000
Pavir.Ia02758
Panicum virgatum
Pavir.Ia02758
N
0.000
Pavir.Db01842
Panicum virgatum
Pavir.Db01842
N
0.000
Pavir.Aa00538
Panicum virgatum
Pavir.Aa00538
N
0.000
orange1.1g013752m.g
Citrus sinensis
orange1.1g013752m.g
N
0.858
ORUFI02G34810
Oryza rufipogon
ORUFI02G34810
N
0.000
Lus10010101.g
Linum usitatissimum
Lus10010101.g
N
0.000
Lus10009475.g
Linum usitatissimum
Lus10009475.g
N
0.000
Lus10001271.g
Linum usitatissimum
Lus10001271.g
N
0.000
Gorai.007G113300
Gossypium raimondii
Gorai.007G113300
N
0.855
Gorai.007G113200
Gossypium raimondii
Gorai.007G113200
N
0.855
gene18888-v1.0-hybrid
Fragaria vesca
gene18888-v1.0-hybrid
N
0.000
gene18608-v1.0-hybrid
Fragaria vesca
gene18608-v1.0-hybrid
N
0.858
gene16221-v1.0-hybrid
Fragaria vesca
gene16221-v1.0-hybrid
N
0.000
evm.TU.supercontig_57.85
Carica papaya
evm.TU.supercontig_57.85
N
0.858
Eucgr.H04738
Eucalyptus grandis
Eucgr.H04738
N
0.000
GLYMA07G05500
Glycine max
GLYMA07G05500
N
0.858
LPERR10G05620
Leersia perrieri
LPERR10G05620
N
0.855
LPERR09G09700
Leersia perrieri
LPERR09G09700
N
0.000
LPERR03G01610
Leersia perrieri
LPERR03G01610
N
0.000
LPERR02G27220
Leersia perrieri
LPERR02G27220
N
0.855
GSMUA_Achr9G15000_001
Musa acuminata
GSMUA_Achr9G15000_001
N
0.000
GSMUA_Achr8G12330_001
Musa acuminata
GSMUA_Achr8G12330_001
N
0.000
GSMUA_Achr11G02740_001
Musa acuminata
GSMUA_Achr11G02740_001
N
0.000
GRMZM2G475289
Zea mays
GRMZM2G475289
N
0.000
GRMZM2G045883
Zea mays
GRMZM2G045883
N
0.000
GRMZM2G008691
Zea mays
GRMZM2G008691
N
0.000
GLYMA16G02020
Glycine max
GLYMA16G02020
N
0.858
MLOC_55870
Hordeum vulgare
MLOC_55870
N
0.000
BRADI3G58360
Brachypodium distachyon
BRADI3G58360
N
0.855
BRADI3G38510
Brachypodium distachyon
BRADI3G38510
N
0.855
BRADI1G77070
Brachypodium distachyon
BRADI1G77070
N
0.000
BRADI1G71990
Brachypodium distachyon
BRADI1G71990
N
0.855
Bra008017
Brassica rapa
Bra008017
N
0.000
Bo4g006950
Brassica oleracea
Bo4g006950
N
0.000
Bo2g075510
Brassica oleracea
Bo2g075510
N
0.000
BGIOSGA032814
Oryza indica
BGIOSGA032814
N
0.000
BGIOSGA011741
Oryza indica
BGIOSGA011741
N
0.000
BGIOSGA005582
Oryza indica
BGIOSGA005582
N
0.000
OMERI02G31750
Oryza meridionalis
OMERI02G31750
N
0.000
ORGLA10G0067600
Oryza glaberrima
ORGLA10G0067600
N
0.000
ORGLA03G0015000
Oryza glaberrima
ORGLA03G0015000
N
0.000
ORGLA02G0287300
Oryza glaberrima
ORGLA02G0287300
N
0.000
OPUNC10G07050
Oryza punctata
OPUNC10G07050
N
0.000
OPUNC03G06240
Oryza punctata
OPUNC03G06240
N
0.000
OPUNC03G01600
Oryza punctata
OPUNC03G01600
N
0.000
OPUNC02G30580
Oryza punctata
OPUNC02G30580
N
0.000
ONIVA10G07810
Oryza nivara
ONIVA10G07810
N
0.000
ONIVA02G35790
Oryza nivara
ONIVA02G35790
N
0.000
ONIVA02G30660
Oryza nivara
ONIVA02G30660
N
0.000
OMERI03G01680
Oryza meridionalis
OMERI03G01680
N
0.000
AC233899.1_FG002
Zea mays
AC233899.1_FG002
N
0.000
OGLUM10G07850
Oryza glumaepatula
OGLUM10G07850
N
0.000
OGLUM03G01710
Oryza glumaepatula
OGLUM03G01710
N
0.000
OGLUM02G33770
Oryza glumaepatula
OGLUM02G33770
N
0.000
OBART10G08120
Oryza barthii
OBART10G08120
N
0.000
OBART03G01740
Oryza barthii
OBART03G01740
N
0.000
OBART02G33270
Oryza barthii
OBART02G33270
N
0.000
OB10G16200
Oryza brachyantha
OB10G16200
N
0.000
OB03G16590
Oryza brachyantha
OB03G16590
N
0.000
OB03G11710
Oryza brachyantha
OB03G11710
N
0.000
OB02G40170
Oryza brachyantha
OB02G40170
N
0.000