CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TRIATDRAFT_299973
(
Trichoderma atroviride
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
TRIATDRAFT_299973
T045861_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02957
M01763_2.00
Neurospora crassa
NMDCGTGBN
NVCACGHKN
PBM
Weirauch et al.(2014)
pTH8839
0.914
0.957
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK45298
bHLH
256
302
LRVSHKLAERKRRTEMKELFDQLRDLMPQERGSKASKWEILTKAIAE
Links
Other
bHLH
family TFs
Other
Trichoderma atroviride
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g009300
Brassica oleracea
Bo2g009300
I
Bra028640
Brassica rapa
Bra028640
I
NAC082
Arabidopsis thaliana
AT5G09330
N
Bo3g005150
Brassica oleracea
Bo3g005150
N
Bo9g174090
Brassica oleracea
Bo9g174090
N
Bra009379
Brassica rapa
Bra009379
N
VNI1
Arabidopsis lyrata
fgenesh2_kg.6__879__AT5G09330.2
N
Bostr.13129s0062
Boechera stricta
Bostr.13129s0062
N
Cagra.1365s0106
Capsella grandiflora
Cagra.1365s0106
N
Carubv10001139m.g
Capsella rubella
Carubv10001139m.g
N
Thhalv10013785m.g
Eutrema salsugineum
Thhalv10013785m.g
N