estExt_fgenesh1_pg.C_1470079 (Physcomitrella patens)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_fgenesh1_pg.C_1470079 T048322_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_1470079 bHLH 833 878

Links

Other bHLH family TFs
Other Physcomitrella patens TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC216731.3_FG001 Zea mays AC216731.3_FG001 N 0.888
AMTR_s00024p00250370 Amborella trichopoda AMTR_s00024p00250370 N 0.888
BHLH83 Arabidopsis thaliana AT1G66470 N 0.888
BHLH86 Arabidopsis thaliana AT5G37800 N 0.888
BGIOSGA002533 Oryza indica BGIOSGA002533 N 0.888
BGIOSGA008903 Oryza indica BGIOSGA008903 N 0.888
Bo00835s050 Brassica oleracea Bo00835s050 N 0.888
Bo6g101000 Brassica oleracea Bo6g101000 N 0.888
Bra019708 Brassica rapa Bra019708 N 0.888
BRADI1G42440 Brachypodium distachyon BRADI1G42440 N 0.856
BRADI2G01000 Brachypodium distachyon BRADI2G01000 N 0.888
BRADI3G53060 Brachypodium distachyon BRADI3G53060 N 0.853
F775_02947 Aegilops tauschii F775_02947 N 0.856
F775_23458 Aegilops tauschii F775_23458 N 0.888
F775_25020 Aegilops tauschii F775_25020 N 0.841
F775_43492 Aegilops tauschii F775_43492 N 0.841
RSL1 Arabidopsis lyrata fgenesh2_kg.7__3192__AT5G37800.1 N 0.888
GLYMA02G41370 Glycine max GLYMA02G41370 N 0.888
GLYMA11G33840 Glycine max GLYMA11G33840 N 0.888
GLYMA14G07590 Glycine max GLYMA14G07590 N 0.888
GLYMA18G04420 Glycine max GLYMA18G04420 N 0.888
GRMZM2G066057 Zea mays GRMZM2G066057 N 0.850
GSMUA_Achr10G20230_001 Musa acuminata GSMUA_Achr10G20230_001 N 0.888
GSMUA_Achr2G22860_001 Musa acuminata GSMUA_Achr2G22860_001 N 0.888
GSMUA_Achr3G01250_001 Musa acuminata GSMUA_Achr3G01250_001 N 0.858
GSMUA_Achr6G09370_001 Musa acuminata GSMUA_Achr6G09370_001 N 0.888
LPERR01G00690 Leersia perrieri LPERR01G00690 N 0.888
LPERR02G24230 Leersia perrieri LPERR02G24230 N 0.888
MLOC_37511 Hordeum vulgare MLOC_37511 N 0.856
MTR_5g079500 Medicago truncatula MTR_5g079500 N 0.888
OB01G10850 Oryza brachyantha OB01G10850 N 0.888
OB02G36990 Oryza brachyantha OB02G36990 N 0.888
OBART01G00850 Oryza barthii OBART01G00850 N 0.888
OBART02G29800 Oryza barthii OBART02G29800 N 0.888
OGLUM01G00830 Oryza glumaepatula OGLUM01G00830 N 0.888
OGLUM02G30450 Oryza glumaepatula OGLUM02G30450 N 0.888
OLONG_010619 Oryza longistaminata OLONG_010619 N 0.888
OMERI01G00290 Oryza meridionalis OMERI01G00290 N 0.888
OMERI02G28660 Oryza meridionalis OMERI02G28660 N 0.888
ONIVA01G00780 Oryza nivara ONIVA01G00780 N 0.888
ONIVA02G32560 Oryza nivara ONIVA02G32560 N 0.888
OPUNC01G00700 Oryza punctata OPUNC01G00700 N 0.888
OPUNC02G27370 Oryza punctata OPUNC02G27370 N 0.888
ORGLA01G0007400 Oryza glaberrima ORGLA01G0007400 N 0.888
ORGLA02G0253300 Oryza glaberrima ORGLA02G0253300 N 0.888
ORUFI01G00830 Oryza rufipogon ORUFI01G00830 N 0.888
ORUFI02G31420 Oryza rufipogon ORUFI02G31420 N 0.888
OS01G0111500 Oryza sativa OS01G0111500 N 0.888
OS02G0710300 Oryza sativa OS02G0710300 N 0.888
PGSC0003DMG400030650 Solanum tuberosum PGSC0003DMG400030650 N 0.888
POPTR_0004s08770 Populus trichocarpa POPTR_0004s08770 N 0.888
POPTR_0005s14360 Populus trichocarpa POPTR_0005s14360 N 0.888
PRUPE_ppa025775mg Prunus persica PRUPE_ppa025775mg N 0.888
Sb03g008290 Sorghum bicolor Sb03g008290 N 0.850
Sb04g030230 Sorghum bicolor Sb04g030230 N 0.888
RHD6 Arabidopsis lyrata scaffold_201372.1 N 0.888
SELMODRAFT_409967 Selaginella moellendorffii SELMODRAFT_409967 N 0.870
SELMODRAFT_413232 Selaginella moellendorffii SELMODRAFT_413232 N 0.868
SELMODRAFT_414414 Selaginella moellendorffii SELMODRAFT_414414 N 0.870
SELMODRAFT_426794 Selaginella moellendorffii SELMODRAFT_426794 N 0.868
Si004720m.g Setaria italica Si004720m.g N 0.885
Si019575m.g Setaria italica Si019575m.g N 0.888
Solyc02g091440.1 Solanum lycopersicum Solyc02g091440.1 N 0.888
TCM_019210 Theobroma cacao TCM_019210 N 0.888
Traes_3AS_0D78930B4 Triticum aestivum Traes_3AS_0D78930B4 N 0.888
TRAES3BF060500180CFD_g Triticum aestivum TRAES3BF060500180CFD_g N 0.888
Traes_6BL_9B25E6A10 Triticum aestivum Traes_6BL_9B25E6A10 N 0.841
Traes_6BL_A964BE52B Triticum aestivum Traes_6BL_A964BE52B N 0.841
Traes_6DL_3DCFAB31F Triticum aestivum Traes_6DL_3DCFAB31F N 0.841
Traes_7BS_A0A8B25DF Triticum aestivum Traes_7BS_A0A8B25DF N 0.856
Traes_7DS_4053B6E88 Triticum aestivum Traes_7DS_4053B6E88 N 0.856
TRIUR3_11692 Triticum urartu TRIUR3_11692 N 0.888
TRIUR3_14379 Triticum urartu TRIUR3_14379 N 0.856
TRIUR3_27166 Triticum urartu TRIUR3_27166 N 0.841
VIT_14s0006g01470 Vitis vinifera VIT_14s0006g01470 N 0.888
Ca_16136 Cicer arietinum Ca_16136 N 0.888
Cla020067 Citrullus lanatus Cla020067 N 0.888
Pm014359 Prunus mume Pm014359 N 0.888
28609.m000209 Ricinus communis 28609.m000209 N 0.888
cassava10199.m1 Manihot esculenta cassava10199.m1 N 0.888
Cucsa.006340 Cucumis sativus Cucsa.006340 N 0.888
estExt_fgenesh1_pg.C_840011 Physcomitrella patens estExt_fgenesh1_pg.C_840011 N 0.914
mgf025678m Mimulus guttatus mgf025678m N 0.888
Aquca_041_00164 Aquilegia coerulea Aquca_041_00164 N 0.888
Bostr.26959s0271 Boechera stricta Bostr.26959s0271 N 0.888
Bostr.9638s0100 Boechera stricta Bostr.9638s0100 N 0.888
Cagra.2629s0001 Capsella grandiflora Cagra.2629s0001 N 0.888
Cagra.8123s0001 Capsella grandiflora Cagra.8123s0001 N 0.853
Carubv10007389m.g Capsella rubella Carubv10007389m.g N 0.888
Carubv10021322m.g Capsella rubella Carubv10021322m.g N 0.888
Ciclev10013420m.g Citrus clementina Ciclev10013420m.g N 0.888
Eucgr.F02831 Eucalyptus grandis Eucgr.F02831 N 0.888
evm.TU.contig_27490 Carica papaya evm.TU.contig_27490 N 0.888
gene17937-v1.0-hybrid Fragaria vesca gene17937-v1.0-hybrid N 0.888
Gorai.001G086800 Gossypium raimondii Gorai.001G086800 N 0.888
Gorai.004G064400 Gossypium raimondii Gorai.004G064400 N 0.888
Lus10017634.g Linum usitatissimum Lus10017634.g N 0.888
Lus10033592.g Linum usitatissimum Lus10033592.g N 0.888
MDP0000435722 Malus domestica MDP0000435722 N 0.888
orange1.1g038918m.g Citrus sinensis orange1.1g038918m.g N 0.888
Pavir.Aa00611 Panicum virgatum Pavir.Aa00611 N 0.888
Pavir.Db01008 Panicum virgatum Pavir.Db01008 N 0.856
Pavir.Eb00817 Panicum virgatum Pavir.Eb00817 N 0.885
Pavir.J04215 Panicum virgatum Pavir.J04215 N 0.888
Pavir.J20533 Panicum virgatum Pavir.J20533 N 0.888
SapurV1A.0102s0280 Salix purpurea SapurV1A.0102s0280 N 0.888
SapurV1A.0230s0340 Salix purpurea SapurV1A.0230s0340 N 0.888
Thhalv10018927m.g Eutrema salsugineum Thhalv10018927m.g N 0.888
Thhalv10028239m.g Eutrema salsugineum Thhalv10028239m.g N 0.888