Sakowv30002492m.g (Saccoglossus kowalevskii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Sakowv30002492m.g T048886_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atoh1
M01754_2.00 		Mus musculus
NMCATATGKN
NMCATATGKN		 PBM
Weirauch et al.(2014)
pTH5074 		0.840 0.849
Atoh1
M02820_2.00 		Mus musculus
RMCATATGBY
RVCATATGKY		 SELEX
Jolma et al.(2013)
Atoh1_1 		0.840 0.849
ATOH1
M04166_2.00 		Homo sapiens
RACAGCTGYY
RRCAGCTGTY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1 		0.840 0.849
ATOH1
M04167_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2 		0.840 0.849
ATOH1
M08738_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B 		0.840 0.849
Atoh1
M08779_2.00 		Mus musculus
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B 		0.840 0.849
Atoh1
M09480_2.00 		Mus musculus
NNRVCAKMTGBY
RVCAKMTGBYNN		 Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111 		0.840 0.849
ATOH1
M09877_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MATH1_Q2 		0.840 0.849
ATOH1
M04168_2.00 		Homo sapiens
AACAGCTGTY
RACAGCTGTT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1 		0.840 0.849
ATOH1
M04169_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2 		0.840 0.849
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23921200_peptide bHLH 80 132

Links

Other bHLH family TFs
Other Saccoglossus kowalevskii TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MAZ Homo sapiens ENSG00000103495 D
Maz Mus musculus ENSMUSG00000030678 D
MAZ Otolemur garnettii ENSOGAG00000033940 I
Pvit_12096 Pogona vitticeps Pvit_12096 I
Myotis_brandtii_MAZ_10014461 Myotis brandtii Myotis_brandtii_MAZ_10014461 I
ENSBTAP00000026016-D1 Bos grunniens ENSBTAP00000026016-D1 I
Alligator_sinensis_CCG001391.4 Alligator sinensis Alligator_sinensis_CCG001391.4 I
ENSSTOG00000027842 Ictidomys tridecemlineatus ENSSTOG00000027842 I
ENSSHAG00000009478 Sarcophilus harrisii ENSSHAG00000009478 I
Maz Rattus norvegicus ENSRNOG00000055082 I
MAZ Pan troglodytes ENSPTRG00000007968 I
MAZ Anolis carolinensis ENSACAG00000014698 I
ENSNLEG00000007559 Nomascus leucogenys ENSNLEG00000007559 I
ENSGMOG00000001761 Gadus morhua ENSGMOG00000001761 I
ENSGACG00000014840 Gasterosteus aculeatus ENSGACG00000014840 I
ENSECAG00000024341 Equus caballus ENSECAG00000024341 I
MAZ Cavia porcellus ENSCPOG00000019886 I
ENSAMEG00000014864 Ailuropoda melanoleuca ENSAMEG00000014864 I