Sakowv30002492m.g (Saccoglossus kowalevskii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Sakowv30002492m.g T048886_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atoh1
M01754_2.00 		Mus musculus
NMCATATGKN
NMCATATGKN		 PBM
Weirauch et al.(2014)
pTH5074 		0.840 0.849
Atoh1
M02820_2.00 		Mus musculus
RMCATATGBY
RVCATATGKY		 SELEX
Jolma et al.(2013)
Atoh1_1 		0.840 0.849
ATOH1
M04166_2.00 		Homo sapiens
RACAGCTGYY
RRCAGCTGTY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1 		0.840 0.849
ATOH1
M04167_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2 		0.840 0.849
ATOH1
M08738_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B 		0.840 0.849
Atoh1
M08779_2.00 		Mus musculus
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B 		0.840 0.849
Atoh1
M09480_2.00 		Mus musculus
NNRVCAKMTGBY
RVCAKMTGBYNN		 Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111 		0.840 0.849
ATOH1
M09877_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MATH1_Q2 		0.840 0.849
ATOH1
M04168_2.00 		Homo sapiens
AACAGCTGTY
RACAGCTGTT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1 		0.840 0.849
ATOH1
M04169_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2 		0.840 0.849
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23921200_peptide bHLH 80 132

Links

Other bHLH family TFs
Other Saccoglossus kowalevskii TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ISCW003667 Ixodes scapularis ISCW003667 I 0.866
ATOH1 Bos taurus ENSBTAG00000002895 I 0.840
ATOH1 Canis familiaris ENSCAFG00000010016 I 0.840
ATOH1 Choloepus hoffmanni ENSCHOG00000000748 I 0.840
ATOH1 Callithrix jacchus ENSCJAG00000022028 I 0.840
ENSCSAG00000000408 Chlorocebus sabaeus ENSCSAG00000000408 I 0.840
ATOH1 Dasypus novemcinctus ENSDNOG00000018799 I 0.840
ATOH1 Equus caballus ENSECAG00000001213 I 0.840
ATOH1 Echinops telfairi ENSETEG00000019807 I 0.840
ATOH1 Homo sapiens ENSG00000172238 D 0.840
ATOH1 Gorilla gorilla ENSGGOG00000001096 I 0.840
ENSLACG00000013212 Latimeria chalumnae ENSLACG00000013212 I 0.840
ENSLAFG00000023246 Loxodonta africana ENSLAFG00000023246 I 0.840
ENSMEUG00000009664 Macropus eugenii ENSMEUG00000009664 I 0.840
ATOH1 Myotis lucifugus ENSMLUG00000008044 I 0.840
ATOH1 Macaca mulatta ENSMMUG00000002367 I 0.840
ATOH1 Monodelphis domestica ENSMODG00000019270 I 0.840
ENSMPUG00000019092 Mustela putorius furo ENSMPUG00000019092 I 0.840
Atoh1 Mus musculus ENSMUSG00000073043 D 0.840
ENSNLEG00000018621 Nomascus leucogenys ENSNLEG00000018621 I 0.840
ATOH1 Oryctolagus cuniculus ENSOCUG00000013154 I 0.840
ATOH1 Otolemur garnettii ENSOGAG00000030783 I 0.840
ATOH1 Ochotona princeps ENSOPRG00000008973 I 0.840
ENSPANG00000000252 Papio anubis ENSPANG00000000252 I 0.840
ENSPPYG00000015283 Pongo abelii ENSPPYG00000015283 I 0.840
ATOH1 Pan troglodytes ENSPTRG00000031141 I 0.840
Atoh1 Rattus norvegicus ENSRNOG00000006383 I 0.840
ENSSHAG00000009094 Sarcophilus harrisii ENSSHAG00000009094 I 0.840
ATOH1 Sus scrofa ENSSSCG00000009196 I 0.840
ENSSTOG00000009183 Ictidomys tridecemlineatus ENSSTOG00000009183 I 0.840
ATOH1 Tupaia belangeri ENSTBEG00000003291 I 0.840
ENSBTAP00000003762-D1 Bos grunniens ENSBTAP00000003762-D1 I 0.840
ENSP00000302216 Macaca fascicularis ENSP00000302216 I 0.840
Myotis_brandtii_ATOH1_10005345 Myotis brandtii Myotis_brandtii_ATOH1_10005345 I 0.840
XP_002937284 Xenopus tropicalis XP_002937284 I 0.840