Carubv10007389m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10007389m.g T049358_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10007389m bHLH 126 172

Links

Other bHLH family TFs
Other Capsella rubella TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.000
Lus10005921.g Linum usitatissimum Lus10005921.g N 0.000
cassava34339.m1 Manihot esculenta cassava34339.m1 N 0.000
cassava39076.m1 Manihot esculenta cassava39076.m1 N 0.000
mgf025545m Mimulus guttatus mgf025545m N 0.000
Bostr.26833s0978 Boechera stricta Bostr.26833s0978 N 0.000
Cagra.0084s0050 Capsella grandiflora Cagra.0084s0050 N 0.000
Carubv10028317m.g Capsella rubella Carubv10028317m.g N 0.000
evm.TU.supercontig_3.98 Carica papaya evm.TU.supercontig_3.98 N 0.000
gene12898-v1.0-hybrid Fragaria vesca gene12898-v1.0-hybrid N 0.000
Gorai.003G121600 Gossypium raimondii Gorai.003G121600 N 0.000
Pm019768 Prunus mume Pm019768 N 0.000
MDP0000141137 Malus domestica MDP0000141137 N 0.000
MDP0000819497 Malus domestica MDP0000819497 N 0.000
SapurV1A.0250s0360 Salix purpurea SapurV1A.0250s0360 N 0.000
SapurV1A.0498s0250 Salix purpurea SapurV1A.0498s0250 N 0.000
Thhalv10015321m.g Eutrema salsugineum Thhalv10015321m.g N 0.000
chr1.CM0033.320.nc Lotus japonicus chr1.CM0033.320.nc N 0.000
chr1.CM0033.390.nc Lotus japonicus chr1.CM0033.390.nc N 0.000
chr4.CM0131.310.nd Lotus japonicus chr4.CM0131.310.nd N 0.000
LjSGA_030914.1 Lotus japonicus LjSGA_030914.1 N 0.000
MTR_3g091700 Medicago truncatula MTR_3g091700 N 0.000
RKD4 Arabidopsis thaliana AT5G53040 N 0.000
Bo2g046220 Brassica oleracea Bo2g046220 N 0.000
Bo9g108730 Brassica oleracea Bo9g108730 N 0.000
Bra003088 Brassica rapa Bra003088 N 0.000
Bra022622 Brassica rapa Bra022622 N 0.000
GLYMA06G13530 Glycine max GLYMA06G13530 N 0.000
GLYMA06G13540 Glycine max GLYMA06G13540 N 0.000
GSMUA_Achr4G08610_001 Musa acuminata GSMUA_Achr4G08610_001 N 0.000
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N 0.000
Cla004331 Citrullus lanatus Cla004331 N 0.000
PGSC0003DMG400018531 Solanum tuberosum PGSC0003DMG400018531 N 0.000
POPTR_0012s02390 Populus trichocarpa POPTR_0012s02390 N 0.000
POPTR_0015s01410 Populus trichocarpa POPTR_0015s01410 N 0.000
PRUPE_ppa015130mg Prunus persica PRUPE_ppa015130mg N 0.000
Solyc03g083040.1 Solanum lycopersicum Solyc03g083040.1 N 0.000
TCM_015430 Theobroma cacao TCM_015430 N 0.000
VIT_16s0098g01730 Vitis vinifera VIT_16s0098g01730 N 0.000
Ca_03992 Cicer arietinum Ca_03992 N 0.000