CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10001683m.g
(
Citrus clementina
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Ciclev10001683m.g
T049464_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10001683m
bHLH
180
228
PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILADTIDYMKELL
Links
Other
bHLH
family TFs
Other
Citrus clementina
TFs
151 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LBD23
Arabidopsis thaliana
AT3G26620
D
0.000
LBD24
Arabidopsis thaliana
AT3G26660
I
0.000
Thhalv10015971m.g
Eutrema salsugineum
Thhalv10015971m.g
I
0.000
Thhalv10005497m.g
Eutrema salsugineum
Thhalv10005497m.g
I
0.000
SapurV1A.0400s0200
Salix purpurea
SapurV1A.0400s0200
I
0.000
evm.TU.supercontig_1.339
Carica papaya
evm.TU.supercontig_1.339
I
0.000
evm.TU.supercontig_1.335
Carica papaya
evm.TU.supercontig_1.335
I
0.000
Carubv10018979m.g
Capsella rubella
Carubv10018979m.g
I
0.000
Cagra.3598s0013
Capsella grandiflora
Cagra.3598s0013
I
0.000
cassava35977.valid.m1
Manihot esculenta
cassava35977.valid.m1
I
0.000
cassava11118.m1
Manihot esculenta
cassava11118.m1
I
0.000
scaffold_500562.1
Arabidopsis lyrata
scaffold_500562.1
I
0.000
POPTR_0012s13910
Populus trichocarpa
POPTR_0012s13910
I
0.000
Bra032938
Brassica rapa
Bra032938
I
0.000
Bra025217
Brassica rapa
Bra025217
I
0.000
Bo7g083780
Brassica oleracea
Bo7g083780
I
0.000
Bo3g065910
Brassica oleracea
Bo3g065910
I
0.000
Bo00285s360
Brassica oleracea
Bo00285s360
I
0.000
29613.m000372
Ricinus communis
29613.m000372
N
0.000
TCM_035123
Theobroma cacao
TCM_035123
N
0.000
POPTR_0015s13870
Populus trichocarpa
POPTR_0015s13870
N
0.000
evm.TU.supercontig_50.154
Carica papaya
evm.TU.supercontig_50.154
N
0.000
SapurV1A.0068s0590
Salix purpurea
SapurV1A.0068s0590
N
0.000