CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.012G078100
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.012G078100
T050107_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK01630.1
M01118_2.00
Cannabis sativa
GCACGTGD
HCACGTGC
PBM
Lambert et al.(2019)
pTH11426
0.873
0.735
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.012G078100.1
bHLH
43
91
YTSHSQAEKRRRDRINAQLSALRELIPMSHKMDKAALLKSAVEQVKDLK
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_173650
Schistosoma mansoni
Smp_173650
I
0.000
Sjc_0021990
Schistosoma japonicum
Sjc_0021990
I
0.000
A_02303
Schistosoma haematobium
A_02303
I
0.000
SCUD_0001691501
Schistosoma curassoni
SCUD_0001691501
I
0.000
SMRZ_0000758001
Schistosoma margrebowiei
SMRZ_0000758001
I
0.000
SMTD_0001766201
Schistosoma mattheei
SMTD_0001766201
I
0.000
SROB_0001231001
Schistosoma rodhaini
SROB_0001231001
I
0.000
csin108146
Clonorchis sinensis
csin108146
N
0.000
ECANG7_01131
Echinococcus canadensis
ECANG7_01131
N
0.000
EmuJ_000079800
Echinococcus multilocularis
EmuJ_000079800
N
0.000
T265_15292
Opisthorchis viverrini
T265_15292
N
0.000
TRE_0001526701
Trichobilharzia regenti
TRE_0001526701
N
0.000