MDP0000249969 (Malus domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MDP0000249969 T050396_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20225.1
M01128_2.00 		Cannabis sativa
NCACGTGVN
NBCACGTGN		 PBM
Lambert et al.(2019)
pTH11274 		0.863 0.857
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000249969 bHLH 76 124

Links

Other bHLH family TFs
Other Malus domestica TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK20225.1 Cannabis sativa PK20225.1 D 0.863
Si002517m.g Setaria italica Si002517m.g I 0.854
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.893
Si002655m.g Setaria italica Si002655m.g I 0.839
TCM_029711 Theobroma cacao TCM_029711 I 0.891
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.866
Ca_06386 Cicer arietinum Ca_06386 I 0.842
Cla019977 Citrullus lanatus Cla019977 I 0.848
29900.m001610 Ricinus communis 29900.m001610 I 0.869
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.891
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.893
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.848
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.846
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.863
Eucgr.D00509 Eucalyptus grandis Eucgr.D00509 I 0.842
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.861
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.863
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.866
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.891
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.849
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.863
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.860
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.863
Pavir.Ca01107 Panicum virgatum Pavir.Ca01107 I 0.839
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.866
Pavir.Ea00439 Panicum virgatum Pavir.Ea00439 I 0.839
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.866
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.894
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.894
OB01G17480 Oryza brachyantha OB01G17480 I 0.855
GRMZM2G088443 Zea mays GRMZM2G088443 I 0.839
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.866
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.866
LPERR01G03590 Leersia perrieri LPERR01G03590 I 0.839
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.866
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.863
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.842
BRADI2G03830 Brachypodium distachyon BRADI2G03830 I 0.839
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.866
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.842
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.855
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.855
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.855
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.855
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.855
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.855
OS01G0218100 Oryza sativa OS01G0218100 I 0.855
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.855
Bra014672 Brassica rapa Bra014672 N 0.843
Bo4g190700 Brassica oleracea Bo4g190700 N 0.846
Bra004599 Brassica rapa Bra004599 N 0.846
GSMUA_Achr3G03510_001 Musa acuminata GSMUA_Achr3G03510_001 N 0.846
Bo4g112750 Brassica oleracea Bo4g112750 N 0.843
SapurV1A.0029s0640 Salix purpurea SapurV1A.0029s0640 N 0.888
SapurV1A.0189s0140 Salix purpurea SapurV1A.0189s0140 N 0.846
Bo4g012960 Brassica oleracea Bo4g012960 N 0.846
Bo3g035410 Brassica oleracea Bo3g035410 N 0.846
Thhalv10006410m.g Eutrema salsugineum Thhalv10006410m.g N 0.846
Thhalv10017546m.g Eutrema salsugineum Thhalv10017546m.g N 0.846
Bra016951 Brassica rapa Bra016951 N 0.846
MDP0000256492 Malus domestica MDP0000256492 N 0.888
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N 0.846
Carubv10023903m.g Capsella rubella Carubv10023903m.g N 0.846
Carubv10017947m.g Capsella rubella Carubv10017947m.g N 0.846
Cagra.1642s0077 Capsella grandiflora Cagra.1642s0077 N 0.846
Cagra.0578s0007 Capsella grandiflora Cagra.0578s0007 N 0.846
Bostr.9345s0019 Boechera stricta Bostr.9345s0019 N 0.846
BHLH106 Arabidopsis thaliana AT2G41130 N 0.846
Traes_5BL_CBFAD4B59 Triticum aestivum Traes_5BL_CBFAD4B59 N 0.846
PRUPE_ppa021837mg Prunus persica PRUPE_ppa021837mg N 0.866