ferd3l (Xenopus tropicalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 XB-GENE-983144 T051938_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FERD3L
M04140_2.00 		Homo sapiens
GYVACAGCTGKYRC
GYRMCAGCTGTBRC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_1 		0.914 0.962
FERD3L
M04141_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_HT-SELEX_2 		0.914 0.962
FERD3L
M04142_2.00 		Homo sapiens
GTVACAGCTGKYRC
GYRMCAGCTGTBAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_1 		0.914 0.962
FERD3L
M04143_2.00 		Homo sapiens
GTRMCAKMTGKYRC
GYRMCAKMTGKYAC		 SELEX
Yin et al.(2017)
FERD3L_FL_Methyl-HT-SELEX_2 		0.914 0.962
Fer3
M05993_2.00 		Drosophila melanogaster
GKVACAGVTG
CABCTGTBMC		 B1H
Zhu et al.(2011)
Fer3_da_SANGER_5_FBgn0037937 		0.890 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI35503 bHLH 66 118

Links

Other bHLH family TFs
Other Xenopus tropicalis TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FERD3L Homo sapiens ENSG00000146618 D 0.914
Fer3 Drosophila melanogaster FBgn0037937 D 0.890
CpipJ_CPIJ010303 Culex pipiens CpipJ_CPIJ010303 I 0.890
CpipJ_CPIJ012703 Culex pipiens CpipJ_CPIJ012703 I 0.890
AAEL006206 Aedes aegypti AAEL006206 I 0.890
ACYPI54231 Acyrthosiphon pisum ACYPI54231 I 0.890
ADAC008115 Anopheles darlingi ADAC008115 I 0.890
AGAP003756 Anopheles gambiae AGAP003756 I 0.890
BGIBMGA004895 Bombyx mori BGIBMGA004895 I 0.890
CapteG220993 Capitella teleta CapteG220993 I 0.855
CPIJ010303 Culex quinquefasciatus CPIJ010303 I 0.890
CPIJ012703 Culex quinquefasciatus CPIJ012703 I 0.890
DAPPUDRAFT_99035 Daphnia pulex DAPPUDRAFT_99035 I 0.890
ENSACAG00000011821 Anolis carolinensis ENSACAG00000011821 I 0.879
ENSAMEG00000019030 Ailuropoda melanoleuca ENSAMEG00000019030 I 0.914
ENSAMXG00000025611 Astyanax mexicanus ENSAMXG00000025611 I 0.879
ENSAPLG00000001417 Anas platyrhynchos ENSAPLG00000001417 I 0.914
FERD3L Bos taurus ENSBTAG00000039955 I 0.914
FERD3L Canis familiaris ENSCAFG00000002506 I 0.914
ENSCSAG00000019609 Chlorocebus sabaeus ENSCSAG00000019609 I 0.914
ferd3l Danio rerio ENSDARG00000092160 I 0.879
FERD3L Dasypus novemcinctus ENSDNOG00000037813 I 0.914
Ferd3l Dipodomys ordii ENSDORG00000012867 I 0.914
FERD3L Equus caballus ENSECAG00000002518 I 0.914
FERD3L Erinaceus europaeus ENSEEUG00000004309 I 0.914
ENSFALG00000014487 Ficedula albicollis ENSFALG00000014487 I 0.914
FERD3L Felis catus ENSFCAG00000010289 I 0.914
FERD3L Gasterosteus aculeatus ENSGACG00000006421 I 0.852
FERD3L Gallus gallus ENSGALG00000010862 I 0.914
FERD3L Gorilla gorilla ENSGGOG00000021943 I 0.914
ENSLACG00000013215 Latimeria chalumnae ENSLACG00000013215 I 0.914
FERD3L Loxodonta africana ENSLAFG00000012782 I 0.914
ENSLOCG00000018351 Lepisosteus oculatus ENSLOCG00000018351 I 0.879
ENSMEUG00000016077 Macropus eugenii ENSMEUG00000016077 I 0.890
FERD3L Meleagris gallopavo ENSMGAG00000015843 I 0.914
ENSMICG00000010110 Microcebus murinus ENSMICG00000010110 I 0.914
FERD3L Myotis lucifugus ENSMLUG00000006930 I 0.914
FERD3L Macaca mulatta ENSMMUG00000011174 I 0.914
FERD3L Monodelphis domestica ENSMODG00000001405 I 0.890
Ferd3l Mus musculus ENSMUSG00000046518 I 0.914
ENSNLEG00000019265 Nomascus leucogenys ENSNLEG00000019265 I 0.914
FERD3L Ornithorhynchus anatinus ENSOANG00000009615 I 0.914
ENSOARG00000008159 Ovis aries ENSOARG00000008159 I 0.914
FERD3L Oryctolagus cuniculus ENSOCUG00000016121 I 0.914
FERD3L Otolemur garnettii ENSOGAG00000014773 I 0.914
FERD3L Ochotona princeps ENSOPRG00000004265 I 0.914
FERD3L Oryzias latipes ENSORLG00000004008 I 0.879
ENSPANG00000010936 Papio anubis ENSPANG00000010936 I 0.914
FERD3L Procavia capensis ENSPCAG00000013680 I 0.914
ENSPFOG00000020055 Poecilia formosa ENSPFOG00000020055 I 0.855
ENSPPYG00000017753 Pongo abelii ENSPPYG00000017753 I 0.914
ENSPSIG00000000691 Pelodiscus sinensis ENSPSIG00000000691 I 0.914
FERD3L Pan troglodytes ENSPTRG00000018961 I 0.914
FERD3L Pteropus vampyrus ENSPVAG00000001711 I 0.914
Ferd3l Rattus norvegicus ENSRNOG00000011091 I 0.914
ENSSHAG00000013034 Sarcophilus harrisii ENSSHAG00000013034 I 0.890
FERD3L Sus scrofa ENSSSCG00000015371 I 0.914
ENSSTOG00000025739 Ictidomys tridecemlineatus ENSSTOG00000025739 I 0.914
FERD3L Tupaia belangeri ENSTBEG00000003400 I 0.914
FERD3L Taeniopygia guttata ENSTGUG00000002644 I 0.914
FERD3L Tetraodon nigroviridis ENSTNIG00000017777 I 0.852
FERD3L Takifugu rubripes ENSTRUG00000014737 I 0.852
ENSTSYG00000010121 Tarsius syrichta ENSTSYG00000010121 I 0.914
ENSXMAG00000020141 Xiphophorus maculatus ENSXMAG00000020141 I 0.855
GA19952 Drosophila pseudoobscura FBgn0079948 I 0.890
GF16621 Drosophila ananassae FBgn0093642 I 0.890
GG17199 Drosophila erecta FBgn0109426 I 0.890
GH19315 Drosophila grimshawi FBgn0126780 I 0.890
GI23534 Drosophila mojavensis FBgn0146260 I 0.890
GI23536 Drosophila mojavensis FBgn0146262 I 0.890
GL12254 Drosophila persimilis FBgn0149861 I 0.890
GM26078 Drosophila sechellia FBgn0180933 I 0.890
GD20641 Drosophila simulans FBgn0192107 I 0.890
GJ10284 Drosophila virilis FBgn0197570 I 0.890
GK11993 Drosophila willistoni FBgn0214004 I 0.890
GE10092 Drosophila yakuba FBgn0227974 I 0.890
GB43632 Apis mellifera GB43632 I 0.890
KGM_11961 Danaus plexippus KGM_11961 I 0.890
L798_14654 Zootermopsis nevadensis L798_14654 I 0.890
LotgiG70434 Lottia gigantea LotgiG70434 I 0.879
NV15852 Nasonia vitripennis NV15852 I 0.890
PHUM129440 Pediculus humanus PHUM129440 I 0.890
SINV15648 Solenopsis invicta SINV15648 I 0.890
SMAR003412 Strigamia maritima SMAR003412 I 0.885
SMAR006706 Strigamia maritima SMAR006706 I 0.914
TC001473 Tribolium castaneum TC001473 I 0.890
tetur07g05370 Tetranychus urticae tetur07g05370 I 0.847
YQE_05939 Dendroctonus ponderosae YQE_05939 I 0.914
Aan_R001045 Calypte anna Aan_R001045 I 0.914
Afo_R003467 Aptenodytes forsteri Afo_R003467 I 0.914
Alligator_sinensis_CCG002586.1 Alligator sinensis Alligator_sinensis_CCG002586.1 I 0.914
Brh_R002964 Buceros rhinoceros Brh_R002964 I 0.914
Cflo_09551--XP_001121057.1_APIME Camponotus floridanus Cflo_09551--XP_001121057.1_APIME I 0.890
Cmyd_10011491 Chelonia mydas Cmyd_10011491 I 0.914
ENSP00000275461-D1 Bos grunniens ENSP00000275461-D1 I 0.914
ENSP00000275461 Macaca fascicularis ENSP00000275461 I 0.914
Gfo_R002784 Geospiza fortis Gfo_R002784 I 0.914
Hsal_03622--XP_001120620.1_APIME Harpegnathos saltator Hsal_03622--XP_001120620.1_APIME I 0.890
Myotis_brandtii_FERD3L_10031741 Myotis brandtii Myotis_brandtii_FERD3L_10031741 I 0.914
Ogr11551 Ophisaurus gracilis Ogr11551 I 0.914
estExt_fgenesh2_pg.C_2000006 Branchiostoma floridae estExt_fgenesh2_pg.C_2000006 I 0.870
estExt_fgenesh2_pg.C_2240018 Branchiostoma floridae estExt_fgenesh2_pg.C_2240018 I 0.870
Ocbimv22002150m.g Octopus bimaculoides Ocbimv22002150m.g I 0.914
Sakowv30007278m.g Saccoglossus kowalevskii Sakowv30007278m.g I 0.865
Sakowv30007307m.g Saccoglossus kowalevskii Sakowv30007307m.g I 0.857
CLEC009418 Cimex lectularius CLEC009418 I 0.890
LCUP001463 Lucilia cuprina LCUP001463 I 0.914
LDEC012244 Leptinotarsa decemlineata LDEC012244 I 0.890
SMU15032200 Schmidtea mediterranea SMU15032200 I 0.857
SMU15040320 Schmidtea mediterranea SMU15040320 I 0.855
AALB002484 Anopheles albimanus AALB002484 I 0.890
AARA010038 Anopheles arabiensis AARA010038 I 0.890
AATE012814 Anopheles atroparvus AATE012814 I 0.890
ACUA002550 Anopheles culicifacies ACUA002550 I 0.890
ADIR002542 Anopheles dirus ADIR002542 I 0.890
AEPI002821 Anopheles epiroticus AEPI002821 I 0.890
AFAF016092 Anopheles farauti AFAF016092 I 0.890
AFUN001530 Anopheles funestus AFUN001530 I 0.890
AMEC003522 Anopheles melas AMEC003522 I 0.890
AMEM014204 Anopheles merus AMEM014204 I 0.890
AMIN002935 Anopheles minimus AMIN002935 I 0.890
AQUA001453 Anopheles quadriannulatus AQUA001453 I 0.890
ASIS006982 Anopheles sinensis ASIS006982 I 0.890
ASTEI00910 Anopheles stephensi ASTEI00910 I 0.890
BGLB008796 Biomphalaria glabrata BGLB008796 I 0.864
LLOJ008652 Lutzomyia longipalpis LLOJ008652 I 0.914
MDOA004267 Musca domestica MDOA004267 I 0.890
MDOA011992 Musca domestica MDOA011992 I 0.914
PPAI004805 Phlebotomus papatasi PPAI004805 I 0.914