CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjT38P01.150.nd
(
Lotus japonicus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
LjT38P01.150.nd
T052174_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjT38P01.150.nd
bHLH
45
94
AAKKHSEAEKRRRTRINGQYDTLRNTLPNIIKKDKATVLSETIKQVKELR
Links
Other
bHLH
family TFs
Other
Lotus japonicus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYB27
Arabidopsis thaliana
AT3G53200
D
0.000
MYB59
Arabidopsis thaliana
AT5G59780
D
0.000
AMTR_s00145p00098450
Amborella trichopoda
AMTR_s00145p00098450
I
0.000
ATMYB48
Arabidopsis thaliana
AT3G46130
I
0.000
BGIOSGA005283
Oryza indica
BGIOSGA005283
I
0.000
BGIOSGA019054
Oryza indica
BGIOSGA019054
I
0.000
BGIOSGA033532
Oryza indica
BGIOSGA033532
I
0.000
BGIOSGA035986
Oryza indica
BGIOSGA035986
I
0.000
Bo3g060620
Brassica oleracea
Bo3g060620
I
0.000
Bo3g130340
Brassica oleracea
Bo3g130340
I
0.000
Bo6g067190
Brassica oleracea
Bo6g067190
I
0.000
Bo8g082570
Brassica oleracea
Bo8g082570
I
0.000
Bra006977
Brassica rapa
Bra006977
I
0.000
Bra018223
Brassica rapa
Bra018223
I
0.000
Bra028550
Brassica rapa
Bra028550
I
0.000
BRADI2G37377
Brachypodium distachyon
BRADI2G37377
I
0.000
BRADI2G62510
Brachypodium distachyon
BRADI2G62510
I
0.000
BRADI4G04050
Brachypodium distachyon
BRADI4G04050
I
0.000
F775_06315
Aegilops tauschii
F775_06315
I
0.000
F775_14172
Aegilops tauschii
F775_14172
I
0.000
F775_28589
Aegilops tauschii
F775_28589
I
0.000
F775_29427
Aegilops tauschii
F775_29427
I
0.000
ATMYB48-1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5001097
I
0.000
AtMYB27
Arabidopsis lyrata
fgenesh2_kg.5__1687__AT3G53200.1
I
0.000
MYB59
Arabidopsis lyrata
fgenesh2_kg.8__1928__AT5G59780.3
I
0.000
GLYMA11G15180
Glycine max
GLYMA11G15180
I
0.000
GLYMA12G07110
Glycine max
GLYMA12G07110
I
0.000
GLYMA13G40830
Glycine max
GLYMA13G40830
I
0.000
GLYMA15G04620
Glycine max
GLYMA15G04620
I
0.000
GRMZM2G047626
Zea mays
GRMZM2G047626
I
0.000
GRMZM2G048136
Zea mays
GRMZM2G048136
I
0.000
GRMZM2G130149
Zea mays
GRMZM2G130149
I
0.000
GRMZM2G305856
Zea mays
GRMZM2G305856
I
0.000
GSMUA_Achr10G03710_001
Musa acuminata
GSMUA_Achr10G03710_001
I
0.000
GSMUA_Achr10G13520_001
Musa acuminata
GSMUA_Achr10G13520_001
I
0.000
GSMUA_Achr10G26730_001
Musa acuminata
GSMUA_Achr10G26730_001
I
0.000
GSMUA_Achr11G24690_001
Musa acuminata
GSMUA_Achr11G24690_001
I
0.000
GSMUA_Achr2G16200_001
Musa acuminata
GSMUA_Achr2G16200_001
I
0.000
GSMUA_Achr5G28350_001
Musa acuminata
GSMUA_Achr5G28350_001
I
0.000
GSMUA_Achr6G15370_001
Musa acuminata
GSMUA_Achr6G15370_001
I
0.000
GSMUA_Achr7G18200_001
Musa acuminata
GSMUA_Achr7G18200_001
I
0.000
GSMUA_Achr8G02640_001
Musa acuminata
GSMUA_Achr8G02640_001
I
0.000
GSMUA_Achr8G34340_001
Musa acuminata
GSMUA_Achr8G34340_001
I
0.000
GSMUA_Achr9G28370_001
Musa acuminata
GSMUA_Achr9G28370_001
I
0.000
LPERR01G40120
Leersia perrieri
LPERR01G40120
I
0.000
LPERR05G01030
Leersia perrieri
LPERR05G01030
I
0.000
LPERR12G13390
Leersia perrieri
LPERR12G13390
I
0.000
MLOC_52439
Hordeum vulgare
MLOC_52439
I
0.000
MLOC_78504
Hordeum vulgare
MLOC_78504
I
0.000
MTR_2g096380
Medicago truncatula
MTR_2g096380
I
0.000
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
0.000
OB01G54920
Oryza brachyantha
OB01G54920
I
0.000
OB05G11070
Oryza brachyantha
OB05G11070
I
0.000
OB07G32480
Oryza brachyantha
OB07G32480
I
0.000
OB11G27690
Oryza brachyantha
OB11G27690
I
0.000
OB12G23080
Oryza brachyantha
OB12G23080
I
0.000
OBART01G45730
Oryza barthii
OBART01G45730
I
0.000
OBART05G01080
Oryza barthii
OBART05G01080
I
0.000
OGLUM05G01090
Oryza glumaepatula
OGLUM05G01090
I
0.000
OLONG_004480
Oryza longistaminata
OLONG_004480
I
0.000
OMERI05G01150
Oryza meridionalis
OMERI05G01150
I
0.000
ONIVA05G01120
Oryza nivara
ONIVA05G01120
I
0.000
OPUNC01G44650
Oryza punctata
OPUNC01G44650
I
0.000
OPUNC05G00970
Oryza punctata
OPUNC05G00970
I
0.000
ORGLA01G0394700
Oryza glaberrima
ORGLA01G0394700
I
0.000
ORGLA11G0187400
Oryza glaberrima
ORGLA11G0187400
I
0.000
ORGLA12G0141600
Oryza glaberrima
ORGLA12G0141600
I
0.000
ORGLA12G0206100
Oryza glaberrima
ORGLA12G0206100
I
0.000
ORUFI01G49220
Oryza rufipogon
ORUFI01G49220
I
0.000
ORUFI05G01110
Oryza rufipogon
ORUFI05G01110
I
0.000
ORUFI11G25190
Oryza rufipogon
ORUFI11G25190
I
0.000
ORUFI12G17930
Oryza rufipogon
ORUFI12G17930
I
0.000
MYBAS1
Oryza sativa
OS11G0700500
I
0.000
MYBAS2
Oryza sativa
OS12G0567300
I
0.000
PGSC0003DMG400015536
Solanum tuberosum
PGSC0003DMG400015536
I
0.000
POPTR_0001s24220
Populus trichocarpa
POPTR_0001s24220
I
0.000
POPTR_0009s03240
Populus trichocarpa
POPTR_0009s03240
I
0.000
PRUPE_ppa015954mg
Prunus persica
PRUPE_ppa015954mg
I
0.000
Sb08g018580
Sorghum bicolor
Sb08g018580
I
0.000
Sb09g001590
Sorghum bicolor
Sb09g001590
I
0.000
Si022826m.g
Setaria italica
Si022826m.g
I
0.000
Si023104m.g
Setaria italica
Si023104m.g
I
0.000
Si024470m.g
Setaria italica
Si024470m.g
I
0.000
Si026803m.g
Setaria italica
Si026803m.g
I
0.000
Solyc09g008390.1
Solanum lycopersicum
Solyc09g008390.1
I
0.000
Solyc11g073120.1
Solanum lycopersicum
Solyc11g073120.1
I
0.000
TCM_022293
Theobroma cacao
TCM_022293
I
0.000
TCM_041904
Theobroma cacao
TCM_041904
I
0.000
Traes_1BS_B44ECE28C
Triticum aestivum
Traes_1BS_B44ECE28C
I
0.000
Traes_1DS_47E2D90AC1
Triticum aestivum
Traes_1DS_47E2D90AC1
I
0.000
Traes_1DS_47E2D90AC
Triticum aestivum
Traes_1DS_47E2D90AC
I
0.000
Traes_3AL_A8AF980F3
Triticum aestivum
Traes_3AL_A8AF980F3
I
0.000
TRAES3BF065400010CFD_g
Triticum aestivum
TRAES3BF065400010CFD_g
I
0.000
Traes_4AL_8B52D54FD
Triticum aestivum
Traes_4AL_8B52D54FD
I
0.000
Traes_4BS_61B30E3E4
Triticum aestivum
Traes_4BS_61B30E3E4
I
0.000
Traes_4DS_0ECE7A421
Triticum aestivum
Traes_4DS_0ECE7A421
I
0.000
TRIUR3_16687
Triticum urartu
TRIUR3_16687
I
0.000
TRIUR3_16862
Triticum urartu
TRIUR3_16862
I
0.000
TRIUR3_22432
Triticum urartu
TRIUR3_22432
I
0.000
VIT_06s0004g04140
Vitis vinifera
VIT_06s0004g04140
I
0.000
AtMYB27
Vitis vinifera
VIT_08s0007g04830
I
0.000
Ca_02593
Cicer arietinum
Ca_02593
I
0.000
Cla008413
Citrullus lanatus
Cla008413
I
0.000
Cla013488
Citrullus lanatus
Cla013488
I
0.000
Cla018782
Citrullus lanatus
Cla018782
I
0.000
Pm000809
Prunus mume
Pm000809
I
0.000
29788.m000340
Ricinus communis
29788.m000340
I
0.000
cassava13589.valid.m1
Manihot esculenta
cassava13589.valid.m1
I
0.000
Cucsa.121500
Cucumis sativus
Cucsa.121500
I
0.000
Cucsa.213500
Cucumis sativus
Cucsa.213500
I
0.000
Cucsa.379880
Cucumis sativus
Cucsa.379880
I
0.000
mgf020363m
Mimulus guttatus
mgf020363m
I
0.000
mgf025691m
Mimulus guttatus
mgf025691m
I
0.000
Aquca_025_00059
Aquilegia coerulea
Aquca_025_00059
I
0.000
Aquca_030_00038
Aquilegia coerulea
Aquca_030_00038
I
0.000
Bostr.9544s0002
Boechera stricta
Bostr.9544s0002
I
0.000
Cagra.0612s0043
Capsella grandiflora
Cagra.0612s0043
I
0.000
Carubv10017875m.g
Capsella rubella
Carubv10017875m.g
I
0.000
Carubv10019409m.g
Capsella rubella
Carubv10019409m.g
I
0.000
evm.TU.supercontig_190.35
Carica papaya
evm.TU.supercontig_190.35
I
0.000
evm.TU.supercontig_92.99
Carica papaya
evm.TU.supercontig_92.99
I
0.000
Gorai.001G107900
Gossypium raimondii
Gorai.001G107900
I
0.000
Gorai.003G136400
Gossypium raimondii
Gorai.003G136400
I
0.000
Gorai.004G145800
Gossypium raimondii
Gorai.004G145800
I
0.000
Gorai.009G413600
Gossypium raimondii
Gorai.009G413600
I
0.000
Gorai.013G265300
Gossypium raimondii
Gorai.013G265300
I
0.000
Lus10005886.g
Linum usitatissimum
Lus10005886.g
I
0.000
MDP0000143156
Malus domestica
MDP0000143156
I
0.000
MDP0000177010
Malus domestica
MDP0000177010
I
0.000
orange1.1g023677m.g
Citrus sinensis
orange1.1g023677m.g
I
0.000
Pavir.Ca00653
Panicum virgatum
Pavir.Ca00653
I
0.000
Pavir.Ca00655
Panicum virgatum
Pavir.Ca00655
I
0.000
Pavir.Ca02588
Panicum virgatum
Pavir.Ca02588
I
0.000
Pavir.Hb00058
Panicum virgatum
Pavir.Hb00058
I
0.000
Pavir.J04129
Panicum virgatum
Pavir.J04129
I
0.000
Pavir.J08441
Panicum virgatum
Pavir.J08441
I
0.000
Pavir.J11500
Panicum virgatum
Pavir.J11500
I
0.000
Pavir.J11826
Panicum virgatum
Pavir.J11826
I
0.000
Pavir.J33560
Panicum virgatum
Pavir.J33560
I
0.000
Pavir.J36591
Panicum virgatum
Pavir.J36591
I
0.000
SapurV1A.0008s0940
Salix purpurea
SapurV1A.0008s0940
I
0.000
SapurV1A.0008s0950
Salix purpurea
SapurV1A.0008s0950
I
0.000
SapurV1A.0040s0010
Salix purpurea
SapurV1A.0040s0010
I
0.000
SapurV1A.0489s0220
Salix purpurea
SapurV1A.0489s0220
I
0.000
Thhalv10002648m.g
Eutrema salsugineum
Thhalv10002648m.g
I
0.000
Thhalv10004588m.g
Eutrema salsugineum
Thhalv10004588m.g
I
0.000
Thhalv10010915m.g
Eutrema salsugineum
Thhalv10010915m.g
I
0.000
Thhalv10014524m.g
Eutrema salsugineum
Thhalv10014524m.g
I
0.000
PK10274.1
Cannabis sativa
PK10274.1
I
0.000
GLYMA10G06680
Glycine max
GLYMA10G06680
N
0.000
GRMZM2G013581
Zea mays
GRMZM2G013581
N
0.000
MTR_1g062940
Medicago truncatula
MTR_1g062940
N
0.000
PGSC0003DMG400028282
Solanum tuberosum
PGSC0003DMG400028282
N
0.000
Solyc10g083900.1
Solanum lycopersicum
Solyc10g083900.1
N
0.000