CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMXG00000017639
(
Astyanax mexicanus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSAMXG00000017639
T058988_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN
NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.873
0.778
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.873
0.778
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.873
0.778
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.873
0.778
TEF
M09983_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.873
0.778
TEF
M09984_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.873
0.778
TEF
M09985_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.873
0.778
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY
RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.873
0.778
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.873
0.778
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.867
0.905
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.867
0.905
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.867
0.905
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB
VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.867
0.905
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.867
0.905
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH
DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.867
0.905
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY
RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.867
0.905
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.867
0.905
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000018166
bZIP
238
300
LKDDKYWARRKKNNMAAKRSRDARRLKENQIAIRAGFLEKENSALRQEVSDLRKELGRCKNII
Links
Other
bZIP
family TFs
Other
Astyanax mexicanus
TFs
209 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA12G0164400
Oryza glaberrima
ORGLA12G0164400
N
0.000
Pavir.J29994
Panicum virgatum
Pavir.J29994
N
0.000
Pavir.J20491
Panicum virgatum
Pavir.J20491
N
0.000
Pavir.Ib04134
Panicum virgatum
Pavir.Ib04134
N
0.000
Pavir.Ia01134
Panicum virgatum
Pavir.Ia01134
N
0.000
Pavir.Ca02859
Panicum virgatum
Pavir.Ca02859
N
0.000
VIT_11s0016g05580
Vitis vinifera
VIT_11s0016g05580
N
0.000
Traes_5BL_8F2E81CCA
Triticum aestivum
Traes_5BL_8F2E81CCA
N
0.000
Sb01g013320
Sorghum bicolor
Sb01g013320
N
0.000
OS12G0620400
Oryza sativa
OS12G0620400
N
0.000
ORUFI12G21360
Oryza rufipogon
ORUFI12G21360
N
0.000
BGIOSGA035814
Oryza indica
BGIOSGA035814
N
0.000
OPUNC12G17310
Oryza punctata
OPUNC12G17310
N
0.000
ONIVA02G25900
Oryza nivara
ONIVA02G25900
N
0.000
OMERI12G13490
Oryza meridionalis
OMERI12G13490
N
0.000
OGLUM12G20810
Oryza glumaepatula
OGLUM12G20810
N
0.000
OBART12G19140
Oryza barthii
OBART12G19140
N
0.000
OB12G26010
Oryza brachyantha
OB12G26010
N
0.000
LPERR12G16300
Leersia perrieri
LPERR12G16300
N
0.000
GRMZM2G157470
Zea mays
GRMZM2G157470
N
0.000
F775_07994
Aegilops tauschii
F775_07994
N
0.000
BRADI4G21540
Brachypodium distachyon
BRADI4G21540
N
0.000