ATF6 (Sus scrofa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSSSCG00000006346 T061419_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF6
M04254_2.00 		Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1 		0.869 0.968
ATF6
M04255_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2 		0.869 0.968
ATF6
M04018_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1 		0.869 0.968
ATF6
M04019_2.00 		Homo sapiens
KAGTCACGTGK
MCACGTGACTM		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2 		0.869 0.968
ATF6
M04020_2.00 		Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3 		0.869 0.968
ATF6
M04021_2.00 		Homo sapiens
ACCACGATGTY
RACATCGTGGT		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4 		0.869 0.968
ATF6
M08790_2.00 		Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB		 Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B 		0.869 0.968
ATF6
M09947_2.00 		Homo sapiens
TGACGTGG
CCACGTCA		 Transfac
Matys et al.(2006)
V$ATF6_01 		0.869 0.968
ATF6
M04256_2.00 		Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1 		0.869 0.968
ATF6
M04257_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2 		0.869 0.968
ATF6B
M04375_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1 		0.817 0.619
ATF6B
M04376_2.00 		Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2 		0.817 0.619
ATF6B
M04377_2.00 		Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3 		0.817 0.619
ATF6B
M04041_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1 		0.817 0.619
ATF6B
M04042_2.00 		Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2 		0.817 0.619
ATF6B
M04043_2.00 		Homo sapiens
RTGACGTCAYC
GRTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3 		0.817 0.619
ATF6B
M04044_2.00 		Homo sapiens
MCCACGATGT
ACATCGTGGK		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4 		0.817 0.619
ATF6B
M04378_2.00 		Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1 		0.817 0.619
ATF6B
M04379_2.00 		Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2 		0.817 0.619
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000006765 bZIP 309 371

Links

Other bZIP family TFs
Other Sus scrofa TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POU2F2 Homo sapiens ENSG00000028277 D 0.000
ceh-18 Caenorhabditis elegans WBGene00000441 D 0.000
Pou3f3 Mus musculus ENSMUSG00000045515 D 0.000
Sjc_0006200 Schistosoma japonicum Sjc_0006200 I 0.000
TTRE_0000958901 Trichuris trichiura TTRE_0000958901 I 0.000
AMAM009299 Anopheles maculatus AMAM009299 I 0.000
D918_02683 Trichuris suis D918_02683 I 0.000
GPUH_0000960301 Gongylonema pulchrum GPUH_0000960301 I 0.000
GPUH_0002653201 Gongylonema pulchrum GPUH_0002653201 I 0.000
L596_g16531 Steinernema carpocapsae L596_g16531 I 0.000
L889_g16900 Steinernema feltiae L889_g16900 I 0.000
L892_g6561 Steinernema scapterisci L892_g6561 I 0.000
L898_g22690 Steinernema monticolum L898_g22690 I 0.000
OESDEN_22180 Oesophagostomum dentatum OESDEN_22180 I 0.000
SBAD_0000845701 Soboliphyme baturini SBAD_0000845701 I 0.000
TELCIR_24859 Teladorsagia circumcincta TELCIR_24859 I 0.000
ENSDNOG00000046180 Dasypus novemcinctus ENSDNOG00000046180 I 0.000
CAA36119 Xenopus laevis CAA36119 I 0.000
ENSXMAG00000019380 Xiphophorus maculatus ENSXMAG00000019380 I 0.000
ENSVPAG00000010276 Vicugna pacos ENSVPAG00000010276 I 0.000
ENSTSYG00000009143 Tarsius syrichta ENSTSYG00000009143 I 0.000
pou5f3 Tetraodon nigroviridis ENSTNIG00000003465 I 0.000
ENSSARG00000008273 Sorex araneus ENSSARG00000008273 I 0.000
POU2F2 Pteropus vampyrus ENSPVAG00000010621 I 0.000
POU2F3 Pan troglodytes ENSPTRG00000004391 I 0.000
ENSPPYG00000003972 Pongo abelii ENSPPYG00000003972 I 0.000
ENSORLG00000014257 Oryzias latipes ENSORLG00000014257 I 0.000
pou3f3b Oryzias latipes ENSORLG00000001901 I 0.000
ENSMLUG00000001011 Myotis lucifugus ENSMLUG00000001011 I 0.000
ENSDORG00000005303 Dipodomys ordii ENSDORG00000005303 I 0.000
L893_g4672 Steinernema glaseri L893_g4672 I 0.000