CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pou3f3
(
Mus musculus
)
POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00157 (Pou)
IPR000327
ENSMUSG00000045515
T316250_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pou3f3
M00553_2.00
Mus musculus
NNDMAWDN
NHWTKHNN
PBM
Berger et al.(2008)
Pou3f3_3235
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pou2f1
M00803_2.00
Mus musculus
NHATWWNHNN
NNDNWWATDN
PBM
Weirauch et al.(2013)
pTH4325
0.778
0.778
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00553_2.00
POU
19
90
PTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD
M00553_2.00
Homeodomain
109
165
RKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEAVRVWFCNRRQKEKR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000052088
POU
314
385
PTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD
Links
Other
POU
family TFs
Other
Mus musculus
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSDORG00000005303
Dipodomys ordii
ENSDORG00000005303
I
1.000
pou3f3b
Oryzias latipes
ENSORLG00000001901
I
1.000
ENSMLUG00000001011
Myotis lucifugus
ENSMLUG00000001011
I
0.944
OESDEN_22180
Oesophagostomum dentatum
OESDEN_22180
I
0.917
TELCIR_24859
Teladorsagia circumcincta
TELCIR_24859
I
0.917
Sjc_0006200
Schistosoma japonicum
Sjc_0006200
I
0.903
GPUH_0000960301
Gongylonema pulchrum
GPUH_0000960301
I
0.889
pou5f3
Tetraodon nigroviridis
ENSTNIG00000003465
I
0.792
ENSGMOG00000000005
Gadus morhua
ENSGMOG00000000005
I
0.778
ENSORLG00000014257
Oryzias latipes
ENSORLG00000014257
I
0.778
ENSTSYG00000009143
Tarsius syrichta
ENSTSYG00000009143
I
0.778
AMAM009299
Anopheles maculatus
AMAM009299
I
0.769
ENSDNOG00000046180
Dasypus novemcinctus
ENSDNOG00000046180
I
0.764
POU2F2
Homo sapiens
ENSG00000028277
D
0.764
ENSPPYG00000003972
Pongo abelii
ENSPPYG00000003972
I
0.764
POU2F3
Pan troglodytes
ENSPTRG00000004391
I
0.764
POU2F2
Pteropus vampyrus
ENSPVAG00000010621
I
0.764
ENSSARG00000008273
Sorex araneus
ENSSARG00000008273
I
0.764
Brh_R009827
Buceros rhinoceros
Brh_R009827
I
0.750
CAA36119
Xenopus laevis
CAA36119
I
0.744
SBAD_0000845701
Soboliphyme baturini
SBAD_0000845701
I
0.722
augustus_masked-nMf.1.1.scaf20785-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf20785-processed-gene-0.0
N
0.708
augustus_masked-nMf.1.1.scaf21308-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf21308-processed-gene-0.0
N
0.708
scaffold518-EXSNAP2012.7
Pristionchus exspectatus
scaffold518-EXSNAP2012.7
N
0.708
ENSVPAG00000010276
Vicugna pacos
ENSVPAG00000010276
I
0.706