CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.4__1126__AT2G31370.4
(
Arabidopsis lyrata
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
fgenesh2_kg.4__1126__AT2G31370.4
T062362_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G21230
M01775_2.00
Arabidopsis thaliana
YGMCAGYTRK
MYARCTGKCR
PBM
Weirauch et al.(2014)
pTH7230
0.787
0.806
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.4__1126__AT2G31370.4
bZIP
199
260
DPKRAKRIWANRQSAARSKERKTRYIFELERKVQTLQTEATTLSAQLTLLQRDTNGLTVENN
Links
Other
bZIP
family TFs
Other
Arabidopsis lyrata
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
npax-1
Caenorhabditis elegans
WBGene00017664
D
CBN13224
Caenorhabditis brenneri
CBN13224
I
CRE26142
Caenorhabditis remanei
CRE26142
I
CJA40106
Caenorhabditis japonica
CJA40106
N