MLOC_66546 (Hordeum vulgare)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 MLOC_66546 T064848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.815 0.691
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.815 0.691
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.808 0.709
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.804 0.800
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.803 0.709
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.803 0.709
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.803 0.709
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.800 0.727
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.800 0.727
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.798 0.691
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.798 0.691
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.798 0.691
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.798 0.691
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.798 0.691
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.798 0.691
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_66546.1 bZIP 286 347
MLOC_66546.2 bZIP 286 344
MLOC_66546.3 bZIP 286 340

Links

Other bZIP family TFs
Other Hordeum vulgare TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS08G0432800 Oryza sativa OS08G0432800 I
OGLUM08G16400 Oryza glumaepatula OGLUM08G16400 I
OMERI08G12930 Oryza meridionalis OMERI08G12930 I
OMERI09G07780 Oryza meridionalis OMERI09G07780 I
ONIVA08G16750 Oryza nivara ONIVA08G16750 I
ONIVA09G09550 Oryza nivara ONIVA09G09550 I
OPUNC08G13730 Oryza punctata OPUNC08G13730 I
ORGLA08G0137400 Oryza glaberrima ORGLA08G0137400 I
ORUFI08G17560 Oryza rufipogon ORUFI08G17560 I
ORUFI09G10670 Oryza rufipogon ORUFI09G10670 I
AMTR_s00002p00019320 Amborella trichopoda AMTR_s00002p00019320 I
OS09G0410700 Oryza sativa OS09G0410700 I
Lus10003471.g Linum usitatissimum Lus10003471.g I
Sb07g021170 Sorghum bicolor Sb07g021170 I
Si013911m.g Setaria italica Si013911m.g I
Traes_4AS_DD16F89E7 Triticum aestivum Traes_4AS_DD16F89E7 I
Traes_4BL_A2B32FCEE Triticum aestivum Traes_4BL_A2B32FCEE I
Traes_4DL_7BD3165FB Triticum aestivum Traes_4DL_7BD3165FB I
TRIUR3_31897 Triticum urartu TRIUR3_31897 I
Lus10015734.g Linum usitatissimum Lus10015734.g I
MLOC_66385 Hordeum vulgare MLOC_66385 I
OBART08G15650 Oryza barthii OBART08G15650 I
LPERR09G06880 Leersia perrieri LPERR09G06880 I
LPERR08G12910 Leersia perrieri LPERR08G12910 I
GRMZM2G526668 Zea mays GRMZM2G526668 I
GRMZM2G107276 Zea mays GRMZM2G107276 I
F775_10096 Aegilops tauschii F775_10096 I
BGIOSGA026937 Oryza indica BGIOSGA026937 I
BGIOSGA029777 Oryza indica BGIOSGA029777 I
Cla022500 Citrullus lanatus Cla022500 N
29908.m006255 Ricinus communis 29908.m006255 N
PK01498.1 Cannabis sativa PK01498.1 N
cassava34286.m1 Manihot esculenta cassava34286.m1 N
Al_scaffold_0007_233 Arabidopsis lyrata Al_scaffold_0007_233 N
Aquca_007_00571 Aquilegia coerulea Aquca_007_00571 N
Ciclev10002205m.g Citrus clementina Ciclev10002205m.g N
Thhalv10027500m.g Eutrema salsugineum Thhalv10027500m.g N
Pavir.Bb02155 Panicum virgatum Pavir.Bb02155 N
gene20797-v1.0-hybrid Fragaria vesca gene20797-v1.0-hybrid N
Gorai.009G230000 Gossypium raimondii Gorai.009G230000 N
Pavir.Ba01821 Panicum virgatum Pavir.Ba01821 N
orange1.1g024930m.g Citrus sinensis orange1.1g024930m.g N
MDP0000562627 Malus domestica MDP0000562627 N
Lus10042017.g Linum usitatissimum Lus10042017.g N
Ca_14981 Cicer arietinum Ca_14981 N
VIT_18s0001g07410 Vitis vinifera VIT_18s0001g07410 N
Traes_5BL_CF90A7CAE Triticum aestivum Traes_5BL_CF90A7CAE N
Solyc04g014360.2 Solanum lycopersicum Solyc04g014360.2 N
Si030496m.g Setaria italica Si030496m.g N
Sb02g024460 Sorghum bicolor Sb02g024460 N
PRUPE_ppa026166mg Prunus persica PRUPE_ppa026166mg N
PGSC0003DMG400023577 Solanum tuberosum PGSC0003DMG400023577 N
MTR_5g066080 Medicago truncatula MTR_5g066080 N
MLOC_12832 Hordeum vulgare MLOC_12832 N
GRMZM2G176141 Zea mays GRMZM2G176141 N
GLYMA14G36010 Glycine max GLYMA14G36010 N
GLYMA02G37720 Glycine max GLYMA02G37720 N
BRADI4G29990 Brachypodium distachyon BRADI4G29990 N
BRADI3G36610 Brachypodium distachyon BRADI3G36610 N
BHLH131 Arabidopsis thaliana AT4G38070 N