CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MTR_7g029400
(
Medicago truncatula
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
MTR_7g029400
T065006_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.832
0.823
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.832
0.823
OS02G0266800
M10046_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RITA1_01
0.804
0.484
OS02G0728001
M01826_2.00
Oryza sativa
NHCACGTGKNN
NNMCACGTGDN
PBM
Weirauch et al.(2014)
pTH8334
0.792
0.661
OS02G0728001
M01827_2.00
Oryza sativa
WSACGTGG
CCACGTSW
PBM
Weirauch et al.(2014)
pTH8737
0.792
0.661
Solyc01g100460.2
M10051_2.00
Solanum lycopersicum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABZ1_01
0.783
0.500
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH22053
bZIP
82
143
DERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLVDKLNHVSESHDKVVQENA
Links
Other
bZIP
family TFs
Other
Medicago truncatula
TFs
183 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATBZIP42
Arabidopsis thaliana
AT3G30530
D
0.832
OS02G0266800
Oryza sativa
OS02G0266800
D
0.804
OS02G0728001
Oryza sativa
OS02G0728001
D
0.792
Solyc01g100460.2
Solanum lycopersicum
Solyc01g100460.2
D
0.783
AMTR_s00002p00268140
Amborella trichopoda
AMTR_s00002p00268140
I
0.792
BGIOSGA006734
Oryza indica
BGIOSGA006734
I
0.804
BGIOSGA007649
Oryza indica
BGIOSGA007649
I
0.804
BGIOSGA008968
Oryza indica
BGIOSGA008968
I
0.792
Bo2g012800
Brassica oleracea
Bo2g012800
I
0.832
Bo3g010620
Brassica oleracea
Bo3g010620
I
0.813
Bo3g010750
Brassica oleracea
Bo3g010750
I
0.811
Bo9g163740
Brassica oleracea
Bo9g163740
I
0.821
Bra006324
Brassica rapa
Bra006324
I
0.811
Bra008670
Brassica rapa
Bra008670
I
0.821
Bra010010
Brassica rapa
Bra010010
I
0.787
Bra020620
Brassica rapa
Bra020620
I
0.796
Bra023540
Brassica rapa
Bra023540
I
0.823
AtbZIP3
Arabidopsis lyrata
fgenesh2_kg.6__1562__AT5G15830.1
I
0.832
GLYMA01G09510
Glycine max
GLYMA01G09510
I
0.879
GLYMA01G40370
Glycine max
GLYMA01G40370
I
0.808
GLYMA02G13960
Glycine max
GLYMA02G13960
I
0.860
GLYMA04G01210
Glycine max
GLYMA04G01210
I
0.792
GLYMA06G01240
Glycine max
GLYMA06G01240
I
0.801
GLYMA11G04920
Glycine max
GLYMA11G04920
I
0.808
GLYMA11G12240
Glycine max
GLYMA11G12240
I
0.830
GLYMA12G04440
Glycine max
GLYMA12G04440
I
0.830
GLYMA17G17100
Glycine max
GLYMA17G17100
I
0.808
GLYMA19G05050
Glycine max
GLYMA19G05050
I
0.846
GRMZM2G020799
Zea mays
GRMZM2G020799
I
0.790
GRMZM2G098904
Zea mays
GRMZM2G098904
I
0.804
GSMUA_Achr10G08670_001
Musa acuminata
GSMUA_Achr10G08670_001
I
0.791
GSMUA_Achr10G12910_001
Musa acuminata
GSMUA_Achr10G12910_001
I
0.813
GSMUA_Achr11G05140_001
Musa acuminata
GSMUA_Achr11G05140_001
I
0.794
GSMUA_Achr1G12710_001
Musa acuminata
GSMUA_Achr1G12710_001
I
0.826
GSMUA_Achr1G25340_001
Musa acuminata
GSMUA_Achr1G25340_001
I
0.783
GSMUA_Achr2G06540_001
Musa acuminata
GSMUA_Achr2G06540_001
I
0.797
GSMUA_Achr4G03790_001
Musa acuminata
GSMUA_Achr4G03790_001
I
0.807
GSMUA_Achr5G05350_001
Musa acuminata
GSMUA_Achr5G05350_001
I
0.796
GSMUA_Achr9G14690_001
Musa acuminata
GSMUA_Achr9G14690_001
I
0.803
LPERR02G04950
Leersia perrieri
LPERR02G04950
I
0.806
MTR_4g097440
Medicago truncatula
MTR_4g097440
I
0.794
MTR_5g015090
Medicago truncatula
MTR_5g015090
I
0.807
MTR_8g015250
Medicago truncatula
MTR_8g015250
I
0.836
OBART02G05680
Oryza barthii
OBART02G05680
I
0.804
OBART02G11580
Oryza barthii
OBART02G11580
I
0.804
OBART02G31030
Oryza barthii
OBART02G31030
I
0.792
OGLUM02G05620
Oryza glumaepatula
OGLUM02G05620
I
0.804
OGLUM02G11500
Oryza glumaepatula
OGLUM02G11500
I
0.804
OGLUM02G31690
Oryza glumaepatula
OGLUM02G31690
I
0.792
OLONG_004835
Oryza longistaminata
OLONG_004835
I
0.792
OMERI02G06470
Oryza meridionalis
OMERI02G06470
I
0.804
OMERI02G12230
Oryza meridionalis
OMERI02G12230
I
0.804
OMERI02G29910
Oryza meridionalis
OMERI02G29910
I
0.792
ONIVA02G06040
Oryza nivara
ONIVA02G06040
I
0.804
ONIVA02G12920
Oryza nivara
ONIVA02G12920
I
0.804
ONIVA02G34180
Oryza nivara
ONIVA02G34180
I
0.792
OPUNC02G10230
Oryza punctata
OPUNC02G10230
I
0.804
OPUNC02G28720
Oryza punctata
OPUNC02G28720
I
0.792
ORGLA02G0052000
Oryza glaberrima
ORGLA02G0052000
I
0.804
ORGLA02G0104200
Oryza glaberrima
ORGLA02G0104200
I
0.804
ORGLA02G0265300
Oryza glaberrima
ORGLA02G0265300
I
0.792
ORUFI02G05790
Oryza rufipogon
ORUFI02G05790
I
0.804
ORUFI02G11610
Oryza rufipogon
ORUFI02G11610
I
0.804
ORUFI02G32700
Oryza rufipogon
ORUFI02G32700
I
0.792
OS02G0175100
Oryza sativa
OS02G0175100
I
0.804
PGSC0003DMG400001916
Solanum tuberosum
PGSC0003DMG400001916
I
0.880
PGSC0003DMG400003701
Solanum tuberosum
PGSC0003DMG400003701
I
0.797
PGSC0003DMG400007523
Solanum tuberosum
PGSC0003DMG400007523
I
0.846
PGSC0003DMG400021431
Solanum tuberosum
PGSC0003DMG400021431
I
0.790
PGSC0003DMG400030946
Solanum tuberosum
PGSC0003DMG400030946
I
0.830
POPTR_0004s16560
Populus trichocarpa
POPTR_0004s16560
I
0.821
POPTR_0007s14740
Populus trichocarpa
POPTR_0007s14740
I
0.815
POPTR_0008s11260
Populus trichocarpa
POPTR_0008s11260
I
0.879
POPTR_0009s12250
Populus trichocarpa
POPTR_0009s12250
I
0.811
POPTR_0010s14530
Populus trichocarpa
POPTR_0010s14530
I
0.877
POPTR_0017s14490
Populus trichocarpa
POPTR_0017s14490
I
0.796
PRUPE_ppa011366mg
Prunus persica
PRUPE_ppa011366mg
I
0.820
PRUPE_ppa011589mg
Prunus persica
PRUPE_ppa011589mg
I
0.874
PRUPE_ppa011644mg
Prunus persica
PRUPE_ppa011644mg
I
0.846
Sb04g005020
Sorghum bicolor
Sb04g005020
I
0.804
Si017778m.g
Setaria italica
Si017778m.g
I
0.804
Si019897m.g
Setaria italica
Si019897m.g
I
0.797
Solyc01g109880.2
Solanum lycopersicum
Solyc01g109880.2
I
0.801
Solyc02g092090.1
Solanum lycopersicum
Solyc02g092090.1
I
0.791
Solyc03g046440.1
Solanum lycopersicum
Solyc03g046440.1
I
0.832
Solyc04g005170.1
Solanum lycopersicum
Solyc04g005170.1
I
0.880
TCM_000835
Theobroma cacao
TCM_000835
I
0.820
VIT_01s0010g00930
Vitis vinifera
VIT_01s0010g00930
I
0.860
VIT_03s0038g04450
Vitis vinifera
VIT_03s0038g04450
I
0.830
VIT_05s0077g01140
Vitis vinifera
VIT_05s0077g01140
I
0.801
Ca_09362
Cicer arietinum
Ca_09362
I
0.815
Ca_17416
Cicer arietinum
Ca_17416
I
0.822
Cla005975
Citrullus lanatus
Cla005975
I
0.855
Cla008074
Citrullus lanatus
Cla008074
I
0.810
Cla015037
Citrullus lanatus
Cla015037
I
0.785
Cla016748
Citrullus lanatus
Cla016748
I
0.858
Cla016841
Citrullus lanatus
Cla016841
I
0.811
Cla020641
Citrullus lanatus
Cla020641
I
0.854
Pm002353
Prunus mume
Pm002353
I
0.820
Pm015434
Prunus mume
Pm015434
I
0.846
30131.m007078
Ricinus communis
30131.m007078
I
0.830
30138.m003866
Ricinus communis
30138.m003866
I
0.879
cassava23775.valid.m1
Manihot esculenta
cassava23775.valid.m1
I
0.783
cassava24775.valid.m1
Manihot esculenta
cassava24775.valid.m1
I
0.830
cassava32522.m1
Manihot esculenta
cassava32522.m1
I
0.879
cassava35454.valid.m1
Manihot esculenta
cassava35454.valid.m1
I
0.805
cassava40461.m1
Manihot esculenta
cassava40461.m1
I
0.808
cassava41140.m1
Manihot esculenta
cassava41140.m1
I
0.827
cassava46237.m1
Manihot esculenta
cassava46237.m1
I
0.879
cassava9577.m1
Manihot esculenta
cassava9577.m1
I
0.846
Cucsa.109420
Cucumis sativus
Cucsa.109420
I
0.800
Cucsa.174700
Cucumis sativus
Cucsa.174700
I
0.846
Cucsa.238410
Cucumis sativus
Cucsa.238410
I
0.858
Cucsa.284240
Cucumis sativus
Cucsa.284240
I
0.854
Cucsa.388800
Cucumis sativus
Cucsa.388800
I
0.785
gw1.83.117.1
Physcomitrella patens
gw1.83.117.1
I
0.812
mgf003466m
Mimulus guttatus
mgf003466m
I
0.833
mgf007535m
Mimulus guttatus
mgf007535m
I
0.796
mgf013074m
Mimulus guttatus
mgf013074m
I
0.796
mgf017392m
Mimulus guttatus
mgf017392m
I
0.860
mgf018581m
Mimulus guttatus
mgf018581m
I
0.797
mgf021986m
Mimulus guttatus
mgf021986m
I
0.820
Aquca_003_00556
Aquilegia coerulea
Aquca_003_00556
I
0.792
Aquca_006_00040
Aquilegia coerulea
Aquca_006_00040
I
0.804
Aquca_006_00360
Aquilegia coerulea
Aquca_006_00360
I
0.854
Aquca_022_00003
Aquilegia coerulea
Aquca_022_00003
I
0.792
Bostr.2902s0318
Boechera stricta
Bostr.2902s0318
I
0.832
Cagra.6845s0027
Capsella grandiflora
Cagra.6845s0027
I
0.837
Carubv10002068m.g
Capsella rubella
Carubv10002068m.g
I
0.823
Ciclev10013334m.g
Citrus clementina
Ciclev10013334m.g
I
0.798
Ciclev10027584m.g
Citrus clementina
Ciclev10027584m.g
I
0.821
Ciclev10029834m.g
Citrus clementina
Ciclev10029834m.g
I
0.822
Ciclev10032777m.g
Citrus clementina
Ciclev10032777m.g
I
0.866
Eucgr.H02330
Eucalyptus grandis
Eucgr.H02330
I
0.827
Eucgr.I02090
Eucalyptus grandis
Eucgr.I02090
I
0.831
evm.TU.supercontig_129.74
Carica papaya
evm.TU.supercontig_129.74
I
0.803
evm.TU.supercontig_538.1
Carica papaya
evm.TU.supercontig_538.1
I
0.830
gene04504-v1.0-hybrid
Fragaria vesca
gene04504-v1.0-hybrid
I
0.860
gene21832-v1.0-hybrid
Fragaria vesca
gene21832-v1.0-hybrid
I
0.817
Gorai.001G251000
Gossypium raimondii
Gorai.001G251000
I
0.860
Gorai.003G032100
Gossypium raimondii
Gorai.003G032100
I
0.824
Gorai.007G056900
Gossypium raimondii
Gorai.007G056900
I
0.806
Gorai.007G277300
Gossypium raimondii
Gorai.007G277300
I
0.792
Gorai.008G065300
Gossypium raimondii
Gorai.008G065300
I
0.784
Gorai.008G085200
Gossypium raimondii
Gorai.008G085200
I
0.791
Lus10011722.g
Linum usitatissimum
Lus10011722.g
I
0.806
Lus10013059.g
Linum usitatissimum
Lus10013059.g
I
0.874
Lus10029101.g
Linum usitatissimum
Lus10029101.g
I
0.874
MDP0000183562
Malus domestica
MDP0000183562
I
0.864
MDP0000205823
Malus domestica
MDP0000205823
I
0.809
MDP0000239026
Malus domestica
MDP0000239026
I
0.813
MDP0000738631
Malus domestica
MDP0000738631
I
0.802
MDP0000863909
Malus domestica
MDP0000863909
I
0.836
MDP0000891108
Malus domestica
MDP0000891108
I
0.864
MDP0000891899
Malus domestica
MDP0000891899
I
0.836
orange1.1g029952m.g
Citrus sinensis
orange1.1g029952m.g
I
0.821
orange1.1g042014m.g
Citrus sinensis
orange1.1g042014m.g
I
0.798
orange1.1g043159m.g
Citrus sinensis
orange1.1g043159m.g
I
0.866
orange1.1g044691m.g
Citrus sinensis
orange1.1g044691m.g
I
0.822
Pavir.Aa03364
Panicum virgatum
Pavir.Aa03364
I
0.804
Pavir.Ab00505
Panicum virgatum
Pavir.Ab00505
I
0.804
SapurV1A.0060s0610
Salix purpurea
SapurV1A.0060s0610
I
0.877
SapurV1A.0084s0340
Salix purpurea
SapurV1A.0084s0340
I
0.874
SapurV1A.0396s0080
Salix purpurea
SapurV1A.0396s0080
I
0.793
SapurV1A.0432s0050
Salix purpurea
SapurV1A.0432s0050
I
0.801
Thhalv10015835m.g
Eutrema salsugineum
Thhalv10015835m.g
I
0.823
PK07533.1
Cannabis sativa
PK07533.1
I
0.817
chr2.CM0021.50.nd
Lotus japonicus
chr2.CM0021.50.nd
I
0.807
chr2.CM0124.640.nd
Lotus japonicus
chr2.CM0124.640.nd
I
0.879
PDK_20s1417191g003
Phoenix dactylifera
PDK_20s1417191g003
I
0.785
POPTR_0014s00790
Populus trichocarpa
POPTR_0014s00790
N
0.788
VIT_18s0001g13040
Vitis vinifera
VIT_18s0001g13040
N
0.787
Ca_15971
Cicer arietinum
Ca_15971
N
0.825
28976.m000155
Ricinus communis
28976.m000155
N
0.796
Ciclev10002731m.g
Citrus clementina
Ciclev10002731m.g
N
0.784
Eucgr.G01645
Eucalyptus grandis
Eucgr.G01645
N
0.782
Eucgr.L01789
Eucalyptus grandis
Eucgr.L01789
N
0.782
evm.TU.supercontig_53.3
Carica papaya
evm.TU.supercontig_53.3
N
0.802
MDP0000261154
Malus domestica
MDP0000261154
N
0.797
orange1.1g041765m.g
Citrus sinensis
orange1.1g041765m.g
N
0.784
SapurV1A.0235s0220
Salix purpurea
SapurV1A.0235s0220
N
0.795
SapurV1A.0608s0130
Salix purpurea
SapurV1A.0608s0130
N
0.787
PK01815.1
Cannabis sativa
PK01815.1
N
0.783