gw1.220.22.1 (Physcomitrella patens)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 gw1.220.22.1 T071162_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05128.1
M01154_2.00 		Cannabis sativa
NNNDBGTRKN
NMYACVHNNN		 PBM
Lambert et al.(2019)
pTH10099 		0.861 0.762
estExt_Genewise1.C_2060077
M01832_2.00 		Physcomitrella patens
NNHSACGTGKNN
NNMCACGTSDNN		 PBM
Weirauch et al.(2014)
pTH8666 		0.810 0.746
OS02G0266800
M10046_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RITA1_01 		0.807 0.587
CPRF2_PETCR
M10069_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_01 		0.789 0.651
CPRF2_PETCR
M10070_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF2_Q2 		0.789 0.651
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.220.22.1 bZIP 113 175

Links

Other bZIP family TFs
Other Physcomitrella patens TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP63 Arabidopsis thaliana AT5G28770 D 0.784
OS02G0266800 Oryza sativa OS02G0266800 D 0.807
CPRF2_PETCR Petroselinum crispum CPRF2_PETCR D 0.789
estExt_Genewise1.C_2060077 Physcomitrella patens estExt_Genewise1.C_2060077 D 0.810
PK05128.1 Cannabis sativa PK05128.1 D 0.861
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I 0.830
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.807
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.807
BGIOSGA037742 Oryza indica BGIOSGA037742 I 0.792
Bo2g151850 Brassica oleracea Bo2g151850 I 0.783
Bo7g093030 Brassica oleracea Bo7g093030 I 0.812
Bra010010 Brassica rapa Bra010010 I 0.826
Bra020620 Brassica rapa Bra020620 I 0.841
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I 0.823
GLYMA03G40730 Glycine max GLYMA03G40730 I 0.845
GLYMA10G30410 Glycine max GLYMA10G30410 I 0.831
GLYMA19G43420 Glycine max GLYMA19G43420 I 0.845
GLYMA20G36750 Glycine max GLYMA20G36750 I 0.831
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.807
GRMZM2G103647 Zea mays GRMZM2G103647 I 0.782
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I 0.830
GSMUA_Achr2G12610_001 Musa acuminata GSMUA_Achr2G12610_001 I 0.783
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I 0.845
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I 0.806
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.805
LPERR12G15130 Leersia perrieri LPERR12G15130 I 0.823
MTR_1g080920 Medicago truncatula MTR_1g080920 I 0.812
MTR_7g115120 Medicago truncatula MTR_7g115120 I 0.816
OB12G24740 Oryza brachyantha OB12G24740 I 0.791
OBART02G05680 Oryza barthii OBART02G05680 I 0.807
OBART02G11580 Oryza barthii OBART02G11580 I 0.807
OBART12G18120 Oryza barthii OBART12G18120 I 0.792
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.807
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.807
OGLUM12G19660 Oryza glumaepatula OGLUM12G19660 I 0.792
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.807
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.807
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.807
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.807
ONIVA12G16860 Oryza nivara ONIVA12G16860 I 0.792
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.807
OPUNC12G16360 Oryza punctata OPUNC12G16360 I 0.823
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.807
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.807
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.807
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.807
ORUFI12G20050 Oryza rufipogon ORUFI12G20050 I 0.792
OS02G0175100 Oryza sativa OS02G0175100 I 0.807
OS12G0601800 Oryza sativa OS12G0601800 I 0.792
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I 0.845
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I 0.845
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I 0.833
PRUPE_ppa005585mg Prunus persica PRUPE_ppa005585mg I 0.797
PRUPE_ppa007814mg Prunus persica PRUPE_ppa007814mg I 0.787
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.807
Sb08g020600 Sorghum bicolor Sb08g020600 I 0.787
Sb10g026450 Sorghum bicolor Sb10g026450 I 0.782
SELMODRAFT_270282 Selaginella moellendorffii SELMODRAFT_270282 I 0.803
SELMODRAFT_439017 Selaginella moellendorffii SELMODRAFT_439017 I 0.803
Si007043m.g Setaria italica Si007043m.g I 0.782
Si017778m.g Setaria italica Si017778m.g I 0.807
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I 0.845
Solyc08g022080.2 Solanum lycopersicum Solyc08g022080.2 I 0.797
TCM_004222 Theobroma cacao TCM_004222 I 0.814
TCM_026349 Theobroma cacao TCM_026349 I 0.843
VIT_07s0141g00170 Vitis vinifera VIT_07s0141g00170 I 0.799
BZO2H3 Vitis vinifera VIT_14s0030g02200 I 0.845
Ca_01234 Cicer arietinum Ca_01234 I 0.797
Ca_03753 Cicer arietinum Ca_03753 I 0.861
Cla011478 Citrullus lanatus Cla011478 I 0.820
Cla015037 Citrullus lanatus Cla015037 I 0.850
Cla020112 Citrullus lanatus Cla020112 I 0.830
Pm003522 Prunus mume Pm003522 I 0.805
Pm005087 Prunus mume Pm005087 I 0.787
Pm020231 Prunus mume Pm020231 I 0.833
29598.m000468 Ricinus communis 29598.m000468 I 0.845
cassava18571.valid.m1 Manihot esculenta cassava18571.valid.m1 I 0.795
cassava18832.valid.m1 Manihot esculenta cassava18832.valid.m1 I 0.784
cassava18833.valid.m1 Manihot esculenta cassava18833.valid.m1 I 0.784
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I 0.844
Cucsa.133290 Cucumis sativus Cucsa.133290 I 0.830
Cucsa.289120 Cucumis sativus Cucsa.289120 I 0.841
Cucsa.388800 Cucumis sativus Cucsa.388800 I 0.850
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I 0.865
gw1.189.102.1 Physcomitrella patens gw1.189.102.1 I 0.792
gw1.213.115.1 Physcomitrella patens gw1.213.115.1 I 0.795
mgf007535m Mimulus guttatus mgf007535m I 0.793
mgf009803m Mimulus guttatus mgf009803m I 0.845
mgf012838m Mimulus guttatus mgf012838m I 0.833
mgf013074m Mimulus guttatus mgf013074m I 0.793
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I 0.846
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I 0.838
Ciclev10008515m.g Citrus clementina Ciclev10008515m.g I 0.789
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I 0.839
Eucgr.C03986 Eucalyptus grandis Eucgr.C03986 I 0.804
Eucgr.H04338 Eucalyptus grandis Eucgr.H04338 I 0.811
EuGene.1500010323 Micromonas sp RCC299 EuGene.1500010323 I 0.787
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I 0.813
gene08757-v1.0-hybrid Fragaria vesca gene08757-v1.0-hybrid I 0.784
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I 0.845
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.786
Gorai.004G075400 Gossypium raimondii Gorai.004G075400 I 0.814
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I 0.861
Gorai.007G141500 Gossypium raimondii Gorai.007G141500 I 0.801
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I 0.835
Lus10006590.g Linum usitatissimum Lus10006590.g I 0.829
Lus10015913.g Linum usitatissimum Lus10015913.g I 0.822
Lus10018759.g Linum usitatissimum Lus10018759.g I 0.798
MDP0000176747 Malus domestica MDP0000176747 I 0.806
MDP0000270365 Malus domestica MDP0000270365 I 0.834
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I 0.845
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I 0.839
orange1.1g015739m.g Citrus sinensis orange1.1g015739m.g I 0.789
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.807
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.807
Pavir.Ca02738 Panicum virgatum Pavir.Ca02738 I 0.782
Pavir.Db00496 Panicum virgatum Pavir.Db00496 I 0.782
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I 0.845
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I 0.843
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I 0.837
PK07533.1 Cannabis sativa PK07533.1 I 0.786
PK09738.1 Cannabis sativa PK09738.1 I 0.789
PK11472.1 Cannabis sativa PK11472.1 I 0.831
chr5.LjT29J15.10.nc Lotus japonicus chr5.LjT29J15.10.nc I 0.785
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I 0.826
PDK_20s1482361g001 Phoenix dactylifera PDK_20s1482361g001 I 0.786