Bo3g023850 (Brassica oleracea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bo3g023850 T081726_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YY1
M01443_2.00 		Arabidopsis thaliana
NNNVCWYNN
NNRWGBNNN		 PBM
Najafabadi et al.(2015a)
pTH11160 		0.817 0.922
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g023850.1 C2H2 ZF 317 341
Bo3g023850.1 C2H2 ZF 346 370
Bo3g023850.1 C2H2 ZF 376 400
Bo3g023850.1 C2H2 ZF 406 431
Bo3g023850.1 C2H2 ZF 470 495

Links

Other C2H2 ZF family TFs
Other Brassica oleracea TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O5_03166 Cladophialophora psammophila A1O5_03166 N
A1O9_10118 Exophiala aquamarina A1O9_10118 N
HMPREF1541_00402 Cyphellophora europaea HMPREF1541_00402 N
PV05_01512 Exophiala xenobiotica PV05_01512 N
PV07_07869 Cladophialophora immunda PV07_07869 N
PV08_10838 Exophiala spinifera PV08_10838 N
PV10_00131 Exophiala mesophila PV10_00131 N
Z517_11856 Fonsecaea pedrosoi Z517_11856 N
Z518_10020 Rhinocladiella mackenziei Z518_10020 N
Z519_10016 Cladophialophora bantiana Z519_10016 N