Bo6g077190 (Brassica oleracea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bo6g077190 T081758_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.803 0.957
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.803 0.935
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.802 0.891
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.775 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g077190.1 C2H2 ZF 177 199
Bo6g077190.1 C2H2 ZF 222 244

Links

Other C2H2 ZF family TFs
Other Brassica oleracea TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU05308 Neurospora crassa NCU05308 D 0.000
TRIATDRAFT_294558 Trichoderma atroviride TRIATDRAFT_294558 I 0.000
NechaG49895 Fusarium solani NechaG49895 I 0.000
OIDMADRAFT_108168 Oidiodendron maius OIDMADRAFT_108168 I 0.000
PFICI_05140 Pestalotiopsis fici PFICI_05140 I 0.000
PODANS_3_4010 Podospora anserina PODANS_3_4010 I 0.000
S40285_08437 Stachybotrys chlorohalonata S40285_08437 I 0.000
S40288_04589 Stachybotrys chartarum S40288_04589 I 0.000
SBOR_0518 Sclerotinia borealis SBOR_0518 I 0.000
SEPMUDRAFT_161432 Sphaerulina musiva SEPMUDRAFT_161432 I 0.000
SMAC_01681 Sordaria macrospora SMAC_01681 I 0.000
SS1G_01905 Sclerotinia sclerotiorum SS1G_01905 I 0.000
MGU_02665 Metarhizium guizhouense MGU_02665 I 0.000
V499_08858 Pseudogymnoascus pannorum V499_08858 I 0.000
VDAG_08009 Verticillium dahliae VDAG_08009 I 0.000
VDBG_01253 Verticillium alfalfae VDBG_01253 I 0.000
VHEMI00550 Torrubiella hemipterigena VHEMI00550 I 0.000
X797_005973 Metarhizium robertsii X797_005973 I 0.000
e_gw1.82.71.1 Nectria haematococca e_gw1.82.71.1 I 0.000
estExt_fgenesh2_pg.C_120136 Neurospora discreta estExt_fgenesh2_pg.C_120136 I 0.000
estExt_Genewise1.C_32477 Cryphonectria parasitica estExt_Genewise1.C_32477 I 0.000
F503_04451 Ophiostoma piceae uamh F503_04451 I 0.000
VDBG_01253 Verticillium albo atrum VDBG_01253 I 0.000
ACRE_065310 Acremonium chrysogenum ACRE_065310 I 0.000
BAUCODRAFT_122462 Baudoinia compniacensis BAUCODRAFT_122462 I 0.000
BBA_06902 Beauveria bassiana BBA_06902 I 0.000
CFIO01_09529 Colletotrichum fioriniae CFIO01_09529 I 0.000
CH063_07756 Colletotrichum higginsianum CH063_07756 I 0.000
Cob_02853 Colletotrichum orbiculare Cob_02853 I 0.000
COCSADRAFT_146273 Bipolaris sorokiniana COCSADRAFT_146273 I 0.000
CPUR_05349 Claviceps purpurea CPUR_05349 I 0.000
CSUB01_05661 Colletotrichum sublineola CSUB01_05661 I 0.000
SNOG_13376 Stagonospora nodorum SNOG_13376 I 0.000
FFUJ_04549 Fusarium fujikuroi FFUJ_04549 I 0.000
FOXG_06378 Fusarium oxysporum FOXG_06378 I 0.000
FPSE_07181 Fusarium pseudograminearum FPSE_07181 I 0.000
FVEG_04228 Fusarium verticillioides FVEG_04228 I 0.000
GGTG_04125 Gaeumannomyces graminis GGTG_04125 I 0.000
GLRG_07219 Colletotrichum graminicola GLRG_07219 I 0.000
GMDG_01402 Pseudogymnoascus destructans GMDG_01402 I 0.000
MAJ_02866 Metarhizium majus MAJ_02866 I 0.000
MBR_01984 Metarhizium brunneum MBR_01984 I 0.000