CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCSADRAFT_136667
(
Bipolaris sorokiniana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
COCSADRAFT_136667
T084125_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_09143
M01450_2.00
Histoplasma capsulatum
WWTTTTTT
AAAAAAWW
PBM
Najafabadi et al.(2015a)
pTH11151
0.777
0.848
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMD67570
C2H2 ZF
208
232
YQCTVPNCNKSFYQKTHLEIHIRAH
EMD67570
C2H2 ZF
238
262
FNCKAPGCGQSFSQLGNLKTHERRH
EMD67570
C2H2 ZF
268
290
YSCDICGKTFAQRGNVRAHKIVH
EMD67570
C2H2 ZF
296
321
FTCKLDDCGKQFTQLGNLKSHQNKFH
Links
Other
C2H2 ZF
family TFs
Other
Bipolaris sorokiniana
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Q8GZQ2_MAIZE
Zea mays
Q8GZQ2_MAIZE
D
0.000
OMERI09G12480
Oryza meridionalis
OMERI09G12480
I
0.000
Traes_5BL_60510E4A7
Triticum aestivum
Traes_5BL_60510E4A7
I
0.000
Si030869m.g
Setaria italica
Si030869m.g
I
0.000
Sb02g030310
Sorghum bicolor
Sb02g030310
I
0.000
DREB1H
Oryza sativa
OS09G0522100
I
0.000
ORUFI09G18200
Oryza rufipogon
ORUFI09G18200
I
0.000
ORGLA09G0133100
Oryza glaberrima
ORGLA09G0133100
I
0.000
OPUNC09G15280
Oryza punctata
OPUNC09G15280
I
0.000
ONIVA09G17890
Oryza nivara
ONIVA09G17890
I
0.000
DREB1H
Oryza indica
BGIOSGA029416
I
0.000
OGLUM09G17420
Oryza glumaepatula
OGLUM09G17420
I
0.000
GRMZM2G124037
Zea mays
GRMZM2G124037
I
0.000
BRADI4G35630
Brachypodium distachyon
BRADI4G35630
I
0.000
BRADI4G35610
Brachypodium distachyon
BRADI4G35610
I
0.000
BRADI4G35580
Brachypodium distachyon
BRADI4G35580
I
0.000
F775_18881
Aegilops tauschii
F775_18881
N
0.000
BRADI4G35600
Brachypodium distachyon
BRADI4G35600
N
0.000
BRADI4G35590
Brachypodium distachyon
BRADI4G35590
N
0.000
BRADI4G35570
Brachypodium distachyon
BRADI4G35570
N
0.000
Traes_5BL_0C3609EF0
Triticum aestivum
Traes_5BL_0C3609EF0
N
0.000
Traes_5BL_5299B6B33
Triticum aestivum
Traes_5BL_5299B6B33
N
0.000
BRADI1G57970
Brachypodium distachyon
BRADI1G57970
N
0.000