CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE21162
(
Caenorhabditis remanei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CRE21162
T085046_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE21162
C2H2 ZF
197
221
HKCLYQGCGKIYTKSSHLTAHERVH
CRE21162
C2H2 ZF
227
251
YPCEWPGCSWRFARSDELTRHYRKH
CRE21162
C2H2 ZF
257
279
FACKECSRKFSRSDHLQLHMKRH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis remanei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra021856
Brassica rapa
Bra021856
I
0.000
chr1.CM0017.80.nc
Lotus japonicus
chr1.CM0017.80.nc
I
0.000
PK12461.1
Cannabis sativa
PK12461.1
I
0.000
MTR_7g005280
Medicago truncatula
MTR_7g005280
I
0.000
GLYMA18G53954
Glycine max
GLYMA18G53954
I
0.000
GLYMA08G47520
Glycine max
GLYMA08G47520
I
0.000
Bo4g181990
Brassica oleracea
Bo4g181990
I
0.000
POPTR_0012s10530
Populus trichocarpa
POPTR_0012s10530
N
0.000
POPTR_0015s11420
Populus trichocarpa
POPTR_0015s11420
N
0.000
PRUPE_ppa027024mg
Prunus persica
PRUPE_ppa027024mg
N
0.000
Pm024558
Prunus mume
Pm024558
N
0.000
30147.m014441
Ricinus communis
30147.m014441
N
0.000
evm.TU.supercontig_4.138
Carica papaya
evm.TU.supercontig_4.138
N
0.000
gene06460-v1.0-hybrid
Fragaria vesca
gene06460-v1.0-hybrid
N
0.000
MDP0000130686
Malus domestica
MDP0000130686
N
0.000
SapurV1A.1562s0030
Salix purpurea
SapurV1A.1562s0030
N
0.000
SapurV1A.1562s0040
Salix purpurea
SapurV1A.1562s0040
N
0.000
SapurV1A.1580s0010
Salix purpurea
SapurV1A.1580s0010
N
0.000