DAPPUDRAFT_319330 (Daphnia pulex)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 DAPPUDRAFT_319330 T085400_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Blimp-1
M03692_2.00 		Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN		 SELEX
Nitta et al.(2015)
Blimp-1_1 		0.813 0.947
Blimp-1
M06141_2.00 		Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT		 B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625 		0.813 0.947
Blimp-1
M06142_2.00 		Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY		 B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625 		0.813 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX79494 C2H2 ZF 932 954
EFX79494 C2H2 ZF 960 982
EFX79494 C2H2 ZF 988 1010
EFX79494 C2H2 ZF 1016 1038
EFX79494 C2H2 ZF 1044 1065

Links

Other C2H2 ZF family TFs
Other Daphnia pulex TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G26865 Arabidopsis thaliana AT5G26865 N
AGL54 Arabidopsis thaliana AT5G27090 N
fgenesh2_kg.6__2748__AT5G27944.1 Arabidopsis lyrata fgenesh2_kg.6__2748__AT5G27944.1 N
fgenesh2_kg.6__2751__AT5G27070.1 Arabidopsis lyrata fgenesh2_kg.6__2751__AT5G27070.1 N
scaffold_602835.1 Arabidopsis lyrata scaffold_602835.1 N
Thhalv10005435m.g Eutrema salsugineum Thhalv10005435m.g N
Thhalv10005452m.g Eutrema salsugineum Thhalv10005452m.g N