ZKSCAN1 (Bos taurus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSBTAG00000016757 T087934_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN1
M05847_2.00 		Homo sapiens
NNNCCTACTAHGH
DCDTAGTAGGNNN		 SMiLE-seq
Isakova et al.(2017)
ZKSCAN1 		0.827 1.000
ZKSCAN1
M08874_2.00 		Homo sapiens
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH		 Misc
Kulakovskiy et al.(2013)
ZKSC1_HUMAN.H11MO.0.B 		0.827 1.000
Zkscan1
M00771_2.00 		Mus musculus
NNNHDHDNNN
NNNHDHDNNN		 PBM
Weirauch et al.(2013)
pTH2280 		0.825 0.993
Zkscan1
M08985_2.00 		Mus musculus
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH		 Misc
Kulakovskiy et al.(2013)
ZKSC1_MOUSE.H11MO.0.A 		0.825 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000029042 C2H2 ZF 377 399
ENSBTAP00000029042 C2H2 ZF 405 427
ENSBTAP00000029042 C2H2 ZF 433 455
ENSBTAP00000029042 C2H2 ZF 461 483
ENSBTAP00000029042 C2H2 ZF 489 511
ENSBTAP00000029042 C2H2 ZF 517 539

Links

Other C2H2 ZF family TFs
Other Bos taurus TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Xbp1 Mus musculus ENSMUSG00000020484 D
XBP1 Homo sapiens ENSG00000100219 D
XBP1 Tetraodon nigroviridis ENSTNIG00000015621 I
ENSOCUG00000006928 Oryctolagus cuniculus ENSOCUG00000006928 I
ENSONIG00000010547 Oreochromis niloticus ENSONIG00000010547 I
ENSOPRG00000013983 Ochotona princeps ENSOPRG00000013983 I
ENSPANG00000000372 Papio anubis ENSPANG00000000372 I
ENSPFOG00000014555 Poecilia formosa ENSPFOG00000014555 I
ENSPPYG00000011678 Pongo abelii ENSPPYG00000011678 I
XBP1 Pan troglodytes ENSPTRG00000014210 I
ENSPVAG00000004528 Pteropus vampyrus ENSPVAG00000004528 I
Xbp1 Rattus norvegicus ENSRNOG00000010298 I
XBP1 Sorex araneus ENSSARG00000002418 I
ENSSHAG00000010795 Sarcophilus harrisii ENSSHAG00000010795 I
ENSSTOG00000004168 Ictidomys tridecemlineatus ENSSTOG00000004168 I
XBP1 Taeniopygia guttata ENSTGUG00000007938 I
XBP1 Ornithorhynchus anatinus ENSOANG00000008817 I
xbp1 Takifugu rubripes ENSTRUG00000016185 I
ENSTSYG00000000515 Tarsius syrichta ENSTSYG00000000515 I
ENSXMAG00000002665 Xiphophorus maculatus ENSXMAG00000002665 I
NEMVEDRAFT_v1g211292 Nematostella vectensis NEMVEDRAFT_v1g211292 I
Aan_R010399 Calypte anna Aan_R010399 I
ENSMMUP00000009460 Macaca fascicularis ENSMMUP00000009460 I
ENSP00000343155-D2 Bos grunniens ENSP00000343155-D2 I
Myotis_brandtii_XBP1_10027497 Myotis brandtii Myotis_brandtii_XBP1_10027497 I
Pvit_02423 Pogona vitticeps Pvit_02423 I
AAI60967 Xenopus tropicalis AAI60967 I
xbp1 Xenopus tropicalis XB-GENE-487124 I
xbp1.L Xenopus laevis XB-GENE-487128 I
XBP1 Gallus gallus ENSGALG00000005796 I
ENSAMXG00000004136 Astyanax mexicanus ENSAMXG00000004136 I
XBP1 Bos taurus ENSBTAG00000005970 I
ENSCAFG00000011954 Canis familiaris ENSCAFG00000011954 I
ENSCHOG00000011608 Choloepus hoffmanni ENSCHOG00000011608 I
XBP1 Callithrix jacchus ENSCJAG00000020084 I
XBP1 Cavia porcellus ENSCPOG00000007796 I
ENSCSAG00000009947 Chlorocebus sabaeus ENSCSAG00000009947 I
xbp1 Danio rerio ENSDARG00000035622 I
ENSDNOG00000034497 Dasypus novemcinctus ENSDNOG00000034497 I
XBP1 Equus caballus ENSECAG00000014780 I
ENSFALG00000008312 Ficedula albicollis ENSFALG00000008312 I
ENSFCAG00000028366 Felis catus ENSFCAG00000028366 I
xbp1 Gasterosteus aculeatus ENSGACG00000014266 I
ENSOARG00000002962 Ovis aries ENSOARG00000002962 I
XBP1 Gorilla gorilla ENSGGOG00000007154 I
ENSGMOG00000000538 Gadus morhua ENSGMOG00000000538 I
XBP1 Loxodonta africana ENSLAFG00000029029 I
ENSLOCG00000003156 Lepisosteus oculatus ENSLOCG00000003156 I
ENSMGAG00000007147 Meleagris gallopavo ENSMGAG00000007147 I
XBP1 Microcebus murinus ENSMICG00000004235 I
ENSMLUG00000001735 Myotis lucifugus ENSMLUG00000001735 I
XBP1 Macaca mulatta ENSMMUG00000007215 I
ENSMODG00000023331 Monodelphis domestica ENSMODG00000023331 I
ENSMPUG00000013524 Mustela putorius furo ENSMPUG00000013524 I
ENSNLEG00000002404 Nomascus leucogenys ENSNLEG00000002404 I
ENSAMEG00000008458 Ailuropoda melanoleuca ENSAMEG00000008458 I