osr2 (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000038006 T090899_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.824 0.986
Osr1
M00144_2.00 		Mus musculus
NVCTHCYNN
NNRGDAGBN		 PBM
Badis et al.(2009)
Osr1_3033 		0.808 0.971
Osr1
M01174_2.00 		Mus musculus
GCTACYGT
ACRGTAGC		 PBM
Lambert et al.(2019)
pTH5339 		0.808 0.971
OSR1
M04477_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX 		0.808 0.971
OSR1
M04478_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX 		0.808 0.971
odd-2
M00618_2.00 		Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN		 PBM
Narasimhan et al.(2015)
pTH9150 		0.766 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000055394 C2H2 ZF 134 156
ENSDARP00000055394 C2H2 ZF 162 184
ENSDARP00000055394 C2H2 ZF 190 212

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS02G0662700 Oryza sativa OS02G0662700 N
ONIVA06G04040 Oryza nivara ONIVA06G04040 N
OPUNC02G24500 Oryza punctata OPUNC02G24500 N
OPUNC04G18860 Oryza punctata OPUNC04G18860 N
ORGLA02G0231500 Oryza glaberrima ORGLA02G0231500 N
ORGLA02G0231600 Oryza glaberrima ORGLA02G0231600 N
ORGLA04G0182200 Oryza glaberrima ORGLA04G0182200 N
ORUFI02G28320 Oryza rufipogon ORUFI02G28320 N
ORUFI02G28330 Oryza rufipogon ORUFI02G28330 N
ORUFI04G22740 Oryza rufipogon ORUFI04G22740 N
ONIVA02G29390 Oryza nivara ONIVA02G29390 N
OS02G0663100 Oryza sativa OS02G0663100 N
OS04G0555000 Oryza sativa OS04G0555000 N
Sb04g032570 Sorghum bicolor Sb04g032570 N
Sb04g032590 Sorghum bicolor Sb04g032590 N
Sb06g024820 Sorghum bicolor Sb06g024820 N
Traes_6AL_4084532FC1 Triticum aestivum Traes_6AL_4084532FC1 N
Traes_6BL_972224088 Triticum aestivum Traes_6BL_972224088 N
Pavir.Aa00854 Panicum virgatum Pavir.Aa00854 N
Pavir.Ga01057 Panicum virgatum Pavir.Ga01057 N
OB02G34120 Oryza brachyantha OB02G34120 N
BGIOSGA008764 Oryza indica BGIOSGA008764 N
BGIOSGA016901 Oryza indica BGIOSGA016901 N
BRADI3G50930 Brachypodium distachyon BRADI3G50930 N
F775_27777 Aegilops tauschii F775_27777 N
GRMZM2G037792 Zea mays GRMZM2G037792 N
GRMZM2G098800 Zea mays GRMZM2G098800 N
GRMZM2G110579 Zea mays GRMZM2G110579 N
GRMZM5G825321 Zea mays GRMZM5G825321 N
MLOC_43989 Hordeum vulgare MLOC_43989 N
BGIOSGA008763 Oryza indica BGIOSGA008763 N
OB02G34130 Oryza brachyantha OB02G34130 N
OBART02G26880 Oryza barthii OBART02G26880 N
OBART02G26890 Oryza barthii OBART02G26890 N
OBART04G21150 Oryza barthii OBART04G21150 N
OGLUM02G27370 Oryza glumaepatula OGLUM02G27370 N
OGLUM02G27380 Oryza glumaepatula OGLUM02G27380 N
OGLUM04G21070 Oryza glumaepatula OGLUM04G21070 N
OLONG_010301 Oryza longistaminata OLONG_010301 N
OMERI04G17630 Oryza meridionalis OMERI04G17630 N