CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GJ15926
(
Drosophila virilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0203113
T116530_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
peb
M06067_2.00
Drosophila melanogaster
KGATGCT
AGCATCM
B1H
Zhu et al.(2011)
peb-F1-3_SANGER_2.5_FBgn0003053
0.820
0.978
peb
M03582_2.00
Drosophila melanogaster
YGGWCCA
TGGWCCR
SELEX
Ming et al.(2013)
CB1
0.820
0.978
peb
M03583_2.00
Drosophila melanogaster
GGATGCTGYK
MRCAGCATCC
SELEX
Ming et al.(2013)
CB2
0.820
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0230343
C2H2 ZF
245
267
YVCPICEVVSATPHEFTNHIRCH
FBpp0230343
C2H2 ZF
277
299
FTCRICSKVLSSASSLDRHVLVH
FBpp0230343
C2H2 ZF
305
327
FNCRYCHLTFTTNGNMHRHMRTH
FBpp0230343
C2H2 ZF
714
736
FPCKLCSAVFPNLRALKGHNRVH
FBpp0230343
C2H2 ZF
746
768
FRCNMCPYAVCDKAALVRHMRTH
FBpp0230343
C2H2 ZF
774
797
YECAVCNYAFTTKANCERHLRNRH
FBpp0230343
C2H2 ZF
1686
1707
ICAFCVRRFWSTEDLRRHMRTH
FBpp0230343
C2H2 ZF
1713
1735
FQCEICLRKFTLKHSMLRHMKKH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila virilis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RSC30
Saccharomyces cerevisiae
YHR056C
D
RSC3
Saccharomyces cerevisiae
YDR303C
D
TPHA_0E01290
Tetrapisispora phaffii
TPHA_0E01290
I
SAKL0G09768g
Lachancea kluyveri
SAKL0G09768g
I
9825_Multiple
Saccharomyces mikatae
9825_Multiple
I
4894_YDR303C
Saccharomyces bayanus
4894_YDR303C
I
4855_Multiple
Saccharomyces paradoxus
4855_Multiple
I
10337_Multiple
Saccharomyces bayanus
10337_Multiple
I
10181_Multiple
Saccharomyces paradoxus
10181_Multiple
I
Scas_Contig588.11
Saccharomyces castellii
Scas_Contig588.11
I
ZYRO0C13882g
Zygosaccharomyces rouxii
ZYRO0C13882g
I
ZBAI_09770
Zygosaccharomyces bailii
ZBAI_09770
I
ZBAI_03963
Zygosaccharomyces bailii
ZBAI_03963
I
AACERI_AaceriAAL057C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAAL057C
I
TDEL_0E03050
Torulaspora delbrueckii
TDEL_0E03050
I
TBLA_0C03390
Tetrapisispora blattae
TBLA_0C03390
I
SU7_2665
Saccharomyces arboricola
SU7_2665
I
SU7_1441
Saccharomyces arboricola
SU7_1441
I
SKUD_196709
Saccharomyces kudriavzevii
SKUD_196709
I
NCAS_0F02700
Naumovozyma castellii
NCAS_0F02700
I
Kpol_1023p41
Vanderwaltozyma polyspora
Kpol_1023p41
I
Kpol_1005p2
Vanderwaltozyma polyspora
Kpol_1005p2
I
KAFR_0E01300
Kazachstania africana
KAFR_0E01300
I
Ecym_3200
Eremothecium cymbalariae
Ecym_3200
I
AGOS_AAL057C
Ashbya gossypii
AGOS_AAL057C
I