9825_Multiple (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 9825_Multiple T390893_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RSC30
M00086_2.00 		Saccharomyces cerevisiae
NGCGCGCGSN
NSCGCGCGCN		 PBM
Badis et al.(2008)
RSC30_2087 		0.683 1.000
RSC30
M01580_2.00 		Saccharomyces cerevisiae
NNDCGSVNN
NNBSCGHNN		 PBM
Zhu et al.(2009)
Rsc30 		0.683 1.000
RSC30
M07513_2.00 		Saccharomyces cerevisiae
VSCGCGCS
SGCGCGSB		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0375.1 		0.683 1.000
RSC30
M08663_2.00 		Saccharomyces cerevisiae
HNHVHCSCGCGCGSGNDVSVN
NBSBHNCSCGCGCGSGDBDND		 Misc
DeBoer et al.(2011)
YHR056C_857 		0.683 1.000
RSC3
M00082_2.00 		Saccharomyces cerevisiae
GCGCGCGG
CCGCGCGC		 PBM
Badis et al.(2008)
RSC3_2035 		0.537 0.816
RSC3
M01576_2.00 		Saccharomyces cerevisiae
NNNNNSCGNN
NNCGSNNNNN		 PBM
Zhu et al.(2009)
Rsc3 		0.537 0.816
RSC3
M07509_2.00 		Saccharomyces cerevisiae
NNVCGCG
CGCGBNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0374.1 		0.537 0.816
RSC3
M08655_2.00 		Saccharomyces cerevisiae
NNVCGCG
CGCGBNN		 Misc
DeBoer et al.(2011)
YDR303C_580 		0.537 0.816
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
9825_Multiple Zinc cluster 13 51

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SU7_1441 Saccharomyces arboricola SU7_1441 I 0.683
RSC30 Saccharomyces cerevisiae YHR056C D 0.683
10181_Multiple Saccharomyces paradoxus 10181_Multiple I 0.683
10337_Multiple Saccharomyces bayanus 10337_Multiple I 0.683
KAFR_0D04590 Kazachstania africana KAFR_0D04590 I 0.562
TBLA_0A02950 Tetrapisispora blattae TBLA_0A02950 I 0.550
AACERI_AaceriAAL057C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL057C I 0.539
AGOS_AAL057C Ashbya gossypii AGOS_AAL057C I 0.539
Kpol_1023p41 Vanderwaltozyma polyspora Kpol_1023p41 I 0.539
Kpol_1005p2 Vanderwaltozyma polyspora Kpol_1005p2 I 0.537
NCAS_0F02700 Naumovozyma castellii NCAS_0F02700 I 0.537
NDAI_0C04170 Naumovozyma dairenensis NDAI_0C04170 I 0.537
SKUD_196709 Saccharomyces kudriavzevii SKUD_196709 I 0.537
SU7_2665 Saccharomyces arboricola SU7_2665 I 0.537
RSC3 Saccharomyces cerevisiae YDR303C D 0.537
Scas_Contig588.11 Saccharomyces castellii Scas_Contig588.11 I 0.537
4855_Multiple Saccharomyces paradoxus 4855_Multiple I 0.537
4894_YDR303C Saccharomyces bayanus 4894_YDR303C I 0.537