CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GE10222
(
Drosophila yakuba
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0228096
T116894_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zif
M06148_2.00
Drosophila melanogaster
WHYAACACTR
YAGTGTTRDW
B1H
Zhu et al.(2011)
CG10267_SANGER_5_FBgn0037446
0.827
0.991
Zif
M06149_2.00
Drosophila melanogaster
YNNHHWHYAACACTASNHNN
NNDNSTAGTGTTRDWDDNNR
B1H
Zhu et al.(2011)
CG10267_SOLEXA_5_FBgn0037446
0.827
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0255232
C2H2 ZF
223
245
YICDVCGNFYEKRGRMMEHRRRH
FBpp0255232
C2H2 ZF
251
273
YACELCDAKFQVREQLRKHMYSH
FBpp0255232
C2H2 ZF
279
301
YKCSFCSRQFFYESVLKSHENVH
FBpp0255232
C2H2 ZF
307
329
YVCKVCDKAFAYAHSLTKHELIH
FBpp0255232
C2H2 ZF
335
359
YRCDYCHKDFRLLHHMRQHEETKLH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila yakuba
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Zif
Drosophila melanogaster
FBgn0037446
D
0.827
GA10205
Drosophila pseudoobscura
FBgn0070264
I
0.771
GF18364
Drosophila ananassae
FBgn0095382
I
0.816
GG13457
Drosophila erecta
FBgn0105729
I
0.827
GH19537
Drosophila grimshawi
FBgn0127002
I
0.806
GI23015
Drosophila mojavensis
FBgn0145742
I
0.808
GL21751
Drosophila persimilis
FBgn0159344
I
0.771
GM10897
Drosophila sechellia
FBgn0165843
I
0.804
GD19876
Drosophila simulans
FBgn0191364
I
0.804
GJ24609
Drosophila virilis
FBgn0211687
I
0.808