CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GH19537
(
Drosophila grimshawi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0127002
T115407_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zif
M06148_2.00
Drosophila melanogaster
WHYAACACTR
YAGTGTTRDW
B1H
Zhu et al.(2011)
CG10267_SANGER_5_FBgn0037446
0.806
0.948
Zif
M06149_2.00
Drosophila melanogaster
YNNHHWHYAACACTASNHNN
NNDNSTAGTGTTRDWDDNNR
B1H
Zhu et al.(2011)
CG10267_SOLEXA_5_FBgn0037446
0.806
0.948
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0153443
C2H2 ZF
227
249
YVCDVCGNFYEKRGRMMEHRRRH
FBpp0153443
C2H2 ZF
255
277
YQCELCDAKFQVREQLRKHMYSH
FBpp0153443
C2H2 ZF
283
305
YKCSYCSRQFFYESVLKSHENVH
FBpp0153443
C2H2 ZF
311
333
YVCKVCDKPFAYAHSLTKHQLIH
FBpp0153443
C2H2 ZF
339
363
YRCDYCQKDFRLLHHMRQHEETKCH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila grimshawi
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GI23015
Drosophila mojavensis
FBgn0145742
I
0.825
GJ24609
Drosophila virilis
FBgn0211687
I
0.825
GF18364
Drosophila ananassae
FBgn0095382
I
0.813
Zif
Drosophila melanogaster
FBgn0037446
D
0.806
GG13457
Drosophila erecta
FBgn0105729
I
0.806
GE10222
Drosophila yakuba
FBgn0228096
I
0.806
GM10897
Drosophila sechellia
FBgn0165843
I
0.792
GD19876
Drosophila simulans
FBgn0191364
I
0.792
GA10205
Drosophila pseudoobscura
FBgn0070264
I
0.771
GL21751
Drosophila persimilis
FBgn0159344
I
0.771