CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA10205
(
Drosophila pseudoobscura
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0070264
T114630_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zif
M06148_2.00
Drosophila melanogaster
WHYAACACTR
YAGTGTTRDW
B1H
Zhu et al.(2011)
CG10267_SANGER_5_FBgn0037446
0.771
0.896
Zif
M06149_2.00
Drosophila melanogaster
YNNHHWHYAACACTASNHNN
NNDNSTAGTGTTRDWDDNNR
B1H
Zhu et al.(2011)
CG10267_SOLEXA_5_FBgn0037446
0.771
0.896
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0300473
C2H2 ZF
222
244
YICDICGNYYEKRGRMMEHRRRH
FBpp0300473
C2H2 ZF
250
272
YQCELCDAEFHVREQLRKHMYSH
FBpp0300473
C2H2 ZF
278
300
FKCSWCSRQFFYESVLKAHENVH
FBpp0300473
C2H2 ZF
306
328
YVCKLCDKPFAYSHSLTKHELIH
FBpp0300473
C2H2 ZF
334
358
YRCDYCQKDFRLLHHMRQHEETKCH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila pseudoobscura
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GL21751
Drosophila persimilis
FBgn0159344
I
0.827
GF18364
Drosophila ananassae
FBgn0095382
I
0.778
Zif
Drosophila melanogaster
FBgn0037446
D
0.771
GG13457
Drosophila erecta
FBgn0105729
I
0.771
GH19537
Drosophila grimshawi
FBgn0127002
I
0.771
GI23015
Drosophila mojavensis
FBgn0145742
I
0.771
GJ24609
Drosophila virilis
FBgn0211687
I
0.771
GE10222
Drosophila yakuba
FBgn0228096
I
0.771
GM10897
Drosophila sechellia
FBgn0165843
I
0.757
GD19876
Drosophila simulans
FBgn0191364
I
0.757