CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA01G0273700
(
Oryza glaberrima
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ORGLA01G0273700
T125065_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA01G0273700.1
C2H2 ZF
246
269
LSCHRCGEQFSKWEALEAHHLSKH
Links
Other
C2H2 ZF
family TFs
Other
Oryza glaberrima
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_05639
Phytophthora parasitica
F443_05639
N
F443_05640
Phytophthora parasitica
F443_05640
N
fgenesh_scip_prom.46568.3348
Phytophthora kernoviae
fgenesh_scip_prom.46568.3348
N
HpaG808440
Hyaloperonospora arabidopsidis
HpaG808440
N
maker-par_contig_289-fgenesh-gene-0.5
Pythium arrhenomanes
maker-par_contig_289-fgenesh-gene-0.5
N
maker-pir_contig_198-fgenesh-gene-0.5
Pythium irregulare
maker-pir_contig_198-fgenesh-gene-0.5
N
PITG_01119
Phytophthora infestans
PITG_01119
N
PYU1_G001963
Pythium ultimum
PYU1_G001963
N
estExt_fgenesh1_pm.C_170169
Phytophthora capsici
estExt_fgenesh1_pm.C_170169
N