CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PITG_01119
(
Phytophthora infestans
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
PITG_01119
T027325_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PITG_01119T0
BED ZF
25
70
KQKNHAESKAKMEADKAGIKCKICMTTFLITASRTQLNDHFESKHS
Links
Other
BED ZF
family TFs
Other
Phytophthora infestans
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.46568.3347
Phytophthora kernoviae
fgenesh_scip_prom.46568.3347
N
0.977
F443_05640
Phytophthora parasitica
F443_05640
N
0.953
HpaG808440
Hyaloperonospora arabidopsidis
HpaG808440
N
0.953
estExt_fgenesh1_pm.C_170169
Phytophthora capsici
estExt_fgenesh1_pm.C_170169
N
0.953
fgenesh_scip_prom.46568.3348
Phytophthora kernoviae
fgenesh_scip_prom.46568.3348
N
0.837
F443_05639
Phytophthora parasitica
F443_05639
N
0.791
maker-pir_contig_198-fgenesh-gene-0.5
Pythium irregulare
maker-pir_contig_198-fgenesh-gene-0.5
N
0.744
PYU1_G001963
Pythium ultimum
PYU1_G001963
N
0.705