CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pir_contig_198-fgenesh-gene-0.5
(
Pythium irregulare
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
maker-pir_contig_198-fgenesh-gene-0.5
T026894_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPI00000017032
BED ZF
25
70
KQKNHAENKGKMAADKESTKCKICMTTFMVTANVKMLNDHFESKHS
Links
Other
BED ZF
family TFs
Other
Pythium irregulare
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PYU1_G001963
Pythium ultimum
PYU1_G001963
N
0.886
HpaG808440
Hyaloperonospora arabidopsidis
HpaG808440
N
0.767
F443_05640
Phytophthora parasitica
F443_05640
N
0.744
fgenesh_scip_prom.46568.3347
Phytophthora kernoviae
fgenesh_scip_prom.46568.3347
N
0.744
PITG_01119
Phytophthora infestans
PITG_01119
N
0.744
estExt_fgenesh1_pm.C_170169
Phytophthora capsici
estExt_fgenesh1_pm.C_170169
N
0.744
maker-par_contig_289-fgenesh-gene-0.5
Pythium arrhenomanes
maker-par_contig_289-fgenesh-gene-0.5
N
0.737
ALNC14_102740
Albugo laibachii
ALNC14_102740
N
0.730
PK26270.1
Cannabis sativa
PK26270.1
N
0.722
fgenesh_scip_prom.46568.3348
Phytophthora kernoviae
fgenesh_scip_prom.46568.3348
N
0.714