PHLGIDRAFT_69101 (Phlebiopsis gigantea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PHLGIDRAFT_69101 T126048_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
cre-1
M01198_2.00 		Neurospora crassa
CCCCRNNN
NNNYGGGG		 PBM
Lambert et al.(2019)
pTH8711 		0.797 0.826
RO3G_16591
M01442_2.00 		Rhizopus oryzae
NCCCCRCDNN
NNHGYGGGGN		 PBM
Najafabadi et al.(2015a)
pTH10231 		0.791 0.783
MIG1
M00026_2.00 		Saccharomyces cerevisiae
HCCCCRCN
NGYGGGGD		 PBM
Badis et al.(2008)
MIG1_2106 		0.758 0.739
MIG1
M01532_2.00 		Saccharomyces cerevisiae
NCYCCRBNNN
NNNVYGGRGN		 PBM
Zhu et al.(2009)
Mig1 		0.758 0.739
MIG1
M07456_2.00 		Saccharomyces cerevisiae
NCCCCRS
SYGGGGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0337.1 		0.758 0.739
MIG1
M08523_2.00 		Saccharomyces cerevisiae
NCCCCRS
SYGGGGN		 Misc
DeBoer et al.(2011)
YGL035C_555 		0.758 0.739
MIG1
M08524_2.00 		Saccharomyces cerevisiae
CCCCRSWWWW
WWWWSYGGGG		 Misc
DeBoer et al.(2011)
YGL035C_654 		0.758 0.739
MIG1
M10391_2.00 		Saccharomyces cerevisiae
NHCCCCRSDTWWWWDDM
KHHWWWWAHSYGGGGDN		 Transfac
Matys et al.(2006)
F$MIG1_01 		0.758 0.739
MIG1
M10392_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MIG1_03 		0.758 0.739
MIG1
M10393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MIG1_Q6 		0.758 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIP08628 C2H2 ZF 26 50
KIP08628 C2H2 ZF 56 80

Links

Other C2H2 ZF family TFs
Other Phlebiopsis gigantea TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava32672.m1 Manihot esculenta cassava32672.m1 I
PK01088.1 Cannabis sativa PK01088.1 I
Thhalv10014754m.g Eutrema salsugineum Thhalv10014754m.g I
MDP0000264051 Malus domestica MDP0000264051 I
MDP0000167314 Malus domestica MDP0000167314 I
Gorai.001G044000 Gossypium raimondii Gorai.001G044000 I
gene31098-v1.0-hybrid Fragaria vesca gene31098-v1.0-hybrid I
evm.TU.supercontig_46.32 Carica papaya evm.TU.supercontig_46.32 I
Eucgr.C01374 Eucalyptus grandis Eucgr.C01374 I
Carubv10028642m.g Capsella rubella Carubv10028642m.g I
Cagra.0084s0008 Capsella grandiflora Cagra.0084s0008 I
Bostr.7305s0011 Boechera stricta Bostr.7305s0011 I
mgf023205m Mimulus guttatus mgf023205m I
AtMYB82 Arabidopsis lyrata Al_scaffold_0008_1642 I
Pm027586 Prunus mume Pm027586 I
PGSC0003DMG400030913 Solanum tuberosum PGSC0003DMG400030913 I
MYB82 Arabidopsis thaliana AT5G52600 I
Bo2g047590 Brassica oleracea Bo2g047590 I
Bo3g023140 Brassica oleracea Bo3g023140 I
Bra022602 Brassica rapa Bra022602 I
Bra029113 Brassica rapa Bra029113 I
Cla016951 Citrullus lanatus Cla016951 I
PRUPE_ppa016532mg Prunus persica PRUPE_ppa016532mg I
Solyc07g008010.2 Solanum lycopersicum Solyc07g008010.2 I
TCM_038131 Theobroma cacao TCM_038131 I
POPTR_0018s12780 Populus trichocarpa POPTR_0018s12780 N
POPTR_0006s06530 Populus trichocarpa POPTR_0006s06530 N
Gorai.004G276500 Gossypium raimondii Gorai.004G276500 N
VIT_11s0016g05660 Vitis vinifera VIT_11s0016g05660 N
SapurV1A.0034s0330 Salix purpurea SapurV1A.0034s0330 N
SapurV1A.2191s0020 Salix purpurea SapurV1A.2191s0020 N
Cucsa.132300 Cucumis sativus Cucsa.132300 N
VIT_11s0016g05690 Vitis vinifera VIT_11s0016g05690 N