CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PV08_01606
(
Exophiala spinifera
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PV08_01606
T127562_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06503
M01888_2.00
Neurospora crassa
NNCCCCDCNN
NNGHGGGGNN
PBM
Weirauch et al.(2014)
pTH8898
0.816
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW21027
C2H2 ZF
33
55
YKCQYCNRAFSRSEHRSRHERSH
KIW21027
C2H2 ZF
61
84
FKCQKCRSTFVRRDLLLRHDRTVH
Links
Other
C2H2 ZF
family TFs
Other
Exophiala spinifera
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA034352
Oryza indica
BGIOSGA034352
N
LPERR11G05260
Leersia perrieri
LPERR11G05260
N
OB11G14640
Oryza brachyantha
OB11G14640
N
OBART11G05830
Oryza barthii
OBART11G05830
N
OGLUM09G19780
Oryza glumaepatula
OGLUM09G19780
N
OLONG_000013
Oryza longistaminata
OLONG_000013
N
OMERI11G04690
Oryza meridionalis
OMERI11G04690
N
ONIVA11G16350
Oryza nivara
ONIVA11G16350
N
OPUNC11G05820
Oryza punctata
OPUNC11G05820
N
OPUNC11G05830
Oryza punctata
OPUNC11G05830
N
ORGLA11G0053000
Oryza glaberrima
ORGLA11G0053000
N
ORUFI11G05730
Oryza rufipogon
ORUFI11G05730
N
OS11G0197600
Oryza sativa
OS11G0197600
N