CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA11G0053000
(
Oryza glaberrima
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
ORGLA11G0053000
T020507_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA11G0053000.1
B3
14
98
RIRFEHLKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFVRDNSIQCGQFLVFTYDKRSQFSVTVFEPS
ORGLA11G0053000.1
B3
273
368
AVQIMMESYVYVGFFMNIPCEFVRECLPRTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDNIKVHIYRVV
Links
Other
B3
family TFs
Other
Oryza glaberrima
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC11G05820
Oryza punctata
OPUNC11G05820
N
0.960
OGLUM09G19780
Oryza glumaepatula
OGLUM09G19780
N
0.951
OMERI11G04690
Oryza meridionalis
OMERI11G04690
N
0.946
ONIVA11G16350
Oryza nivara
ONIVA11G16350
N
0.946
BGIOSGA034352
Oryza indica
BGIOSGA034352
N
0.931
OBART11G05830
Oryza barthii
OBART11G05830
N
0.931
OLONG_000013
Oryza longistaminata
OLONG_000013
N
0.931
ORUFI11G05730
Oryza rufipogon
ORUFI11G05730
N
0.931
OS11G0197600
Oryza sativa
OS11G0197600
N
0.926
OB11G14640
Oryza brachyantha
OB11G14640
N
0.856
OPUNC11G05830
Oryza punctata
OPUNC11G05830
N
0.835
LPERR11G05260
Leersia perrieri
LPERR11G05260
N
0.750
Si027380m.g
Setaria italica
Si027380m.g
N
0.740
Pavir.Ha01581
Panicum virgatum
Pavir.Ha01581
N
0.701